Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A4256 |
Symbol | |
ID | 4003951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 239446 |
End bp | 240123 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637945395 |
Product | short chain dehydrogenase |
Protein accession | YP_556796 |
Protein GI | 91781590 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.55035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.209111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG TGTTGATCGT CGGTGCGTCG CGTGGCATTG GCCAGGAGTT TGTGCGGCAG TACAAGAAGA GCGGCTGGCG CGCGCTCGCC ACCGCCCGCG ACGGCGCCGC GCTTGACGCG TTGAACGAAC TCGGCGCGGA AACGTTCTCG CTCGATGTGA GCATGCCGGA GGAAATCGCC GCGCTCGGCT GGAAGCTCGA CGGTGAACGG CTCGATGCGG CGATTCTGGT GTCGGGCGTC TACGGCCCGC GCACCGAAGG CATCGAGACG ATCACCGCCG AAGACTTCGA CCACGTCATG CACACCAATG TGCGCGGACC GATGCAATTG ATGCCGATCC TGCTGCCGCT CGTCGAAGAA GCGGGCGGCG TATTCGCGGT GATTTCGAGC AAGATGGGCA GCATCGGCGA CGCGAGCGGC ACGACCGGCT GGCTGTATCG CGCGAGCAAG GCGGCGCTGA ACGATGCGCT GAAACTCGCG TCGCTGGAGG CAAAGCGCGC CGCGTGCATT TCGTTGCATC CGGGCTGGGT TCGCACCGAC TTGGGCGGCG CGCAGGCTGC GATCGATCCG GCGCGCAGCG TTACCGGCAT GCGTGAAGTG CTCGCGCAAG CGGCGACCGA GCATGAAGCA TTCAACGGCC GGTTTTATCA GTACGACGGT ACGTTACTCG ACTGGTGA
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Protein sequence | MKTVLIVGAS RGIGQEFVRQ YKKSGWRALA TARDGAALDA LNELGAETFS LDVSMPEEIA ALGWKLDGER LDAAILVSGV YGPRTEGIET ITAEDFDHVM HTNVRGPMQL MPILLPLVEE AGGVFAVISS KMGSIGDASG TTGWLYRASK AALNDALKLA SLEAKRAACI SLHPGWVRTD LGGAQAAIDP ARSVTGMREV LAQAATEHEA FNGRFYQYDG TLLDW
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