Gene Bxe_A4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4234 
Symbol 
ID4004264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp265326 
End bp266558 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content65% 
IMG OID637945417 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_556818 
Protein GI91781612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.408833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA TCGAATCCCT TGAACCTCGA ACCCGGCGCG CTCGCGTGTC GAATCTGCGC 
CTCGATCAAT CGCGCGACCG GCTCGCGCGC CGTGCCGTGG CGTTATGCGC GGCACTCGCC
GGCCTGTTGC CCGGCATTGC ACTGGCGCAG GTGAAAATCG GCCTCGTGCT GTCGCTGACC
GGGCCGGCCG CTTCGCTCGG CATTCCCGCG CGCGATACGG TCGCGCTGCT GCCCAGGCAG
ATCGGCGGGC AGAGTGTCGA ATACATCGTG CTCGACGACG CGTCCGATAC CACCCAGGCC
GTGCAGGACA CCAAGAAGCT GATCTCCGAG AATCACGTCG ACGCGATCAT CGGCTCGTCG
ATCACGCCGA ATTCGCTGGC GATGATCGAC GTGGTTGCCG AAGGTGAAAC GCCGATGATC
TCGCTGGCGT CGTCGGCGAA AATCATCGAG CCCGTGGATG CGAAACGCCA CTGGGTCTTC
AAGACGCCGC AGACCGACGC GATGATGGCG TCGGCGATCG CCGAACACGC CAGCCTGCAT
GGCGTCAAAA CCATCGCGTT CATCGGCCAG GCCGACGCGC TGGGCGAAAC TTTTTACACC
GAGGTCGCGA AGTTCGCGCA ACTGCATCAC ATCGATATGG TGGCGAGCGA GCGCTTCAAT
CGCACCGATC CGAGCGTGAC CGGCCAGGTC CTCAAGATTC TGGCGACGCA TCCCGATGCG
GTAGTGGTCG GCGCGGCCGG CACGCCCGCC GCGTTGCCGC CGAAGACGCT CCGGGAACGC
GGCTACAAAG GGCTGATCTA TCACAATCAT GGGGTCGGCA ATAACGACTT CCTGCGCGTG
TGCGGCGCGG ATTGCAACGG CACCTTCCTG CCCGCGAGTC CGGTGCTGGT CGCCGCCCAA
TTGCCGGCGG ATCATCCGGC CAAGCGGCTC GCACTCGATT ACATCGCGCG TTTCGAAGCG
GTGCGCGGCG CTGGCAGCGT GTCGGCCTTC GGCTCGTACA CGTGGGACGC GGGCATGCTG
CTCGGCCATG CGGTACCGGT CGCGCTGAAG ACTGCCGCAC CGGGCACGCC GGAATTTCGC
CGCGCGCTGC GCGATGCGCT CGAGTCGACG CGAGGTCTCG CGGATACCAA CGGTGTCGTC
AACATGAGCG CGACGGACCA TCTCGGGCTC GATCAACGGG CGCGTGTGAT GGTCGAAATC
AGGAATGCGA AGTGGGTTTA TCAGCCGCGC TGA
 
Protein sequence
MPQIESLEPR TRRARVSNLR LDQSRDRLAR RAVALCAALA GLLPGIALAQ VKIGLVLSLT 
GPAASLGIPA RDTVALLPRQ IGGQSVEYIV LDDASDTTQA VQDTKKLISE NHVDAIIGSS
ITPNSLAMID VVAEGETPMI SLASSAKIIE PVDAKRHWVF KTPQTDAMMA SAIAEHASLH
GVKTIAFIGQ ADALGETFYT EVAKFAQLHH IDMVASERFN RTDPSVTGQV LKILATHPDA
VVVGAAGTPA ALPPKTLRER GYKGLIYHNH GVGNNDFLRV CGADCNGTFL PASPVLVAAQ
LPADHPAKRL ALDYIARFEA VRGAGSVSAF GSYTWDAGML LGHAVPVALK TAAPGTPEFR
RALRDALEST RGLADTNGVV NMSATDHLGL DQRARVMVEI RNAKWVYQPR