| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4182 |
|---|
| Symbol | |
|---|
| ID | 4002261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 315918 |
|---|
| End bp | 317498 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637945469 |
|---|
| Product | peptidase S41A |
|---|
| Protein accession | YP_556870 |
|---|
| Protein GI | 91781664 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGA ACCTGAAAAA TATCGGCCTG ATTGCCGCGG GCCTTGCTAC CGGTGTATTT
GCCACTCTGC AGCTTTCCGC TTCGGCGCAG CAACCGGCTA GCGCCGCCTC CAGCGCCGTT
GCACCGCTGC CGCTGGACCA GCTCCGGCTG TTTGCCGAAG TGTTCGGGCA AATCAAGCAT
GAATACGTCG AACCGGTCGA CGACAAAAAG CTTCTCACCG CCGCCATCAA GGGCATGGTG
TCGAGCCTCG ACCCGCACTC GTCGTATCTC GACAAGACCG ATTACGAGGA ACTGCAGGAG
CAGACCAAGG GTCGCTTCGC CGGTCTCGGC ATCGAGATCT CGTCGGAAGA CGGCCTGATC
AAAGTGATTT CGCCGATCGA AGACACGCCC GCGTTCCGCG CCGGCATCCG TCCGGGCGAC
CTGATCACGC GTATCAACGA CAAACCCGTG CGCGGCATGA CGCTCGACCA GGCGGTCAAG
CAGATGCGCG GCGACCCGGG CACCAAGGTC ACGCTCACCA TCTTCCGCAA GACCGACGAC
CGCACGTTCC CGCTCACCGT GACGCGCGCG ATCATCAAGG TCCAGTCGGT CAAGATGAAG
ATCCTCGCGC CGGGTTACGC CTATGTGCGT ATCACCAGCT TCCAGGAACG CACCACGCCT
GATCTGGCCG CGAAGCTGCA GGACATCGCG CGTCAGCAGC CGAATCTGAA AGGTCTCGTG
CTCGACCTGC GCAATAACGG CGGCGGTCTG CTGCAAAGCG CGGTCGGCGT AGCCGGCGCG
TTCCTGCCGC CGAATTCGGT GGTGGTGTCC ACCAACGGCC AGATTCCGGA TTCGAAGCAG
GTCTATCGCG ACACTTACGA CAACTACCGC CTGCAGTCTT TCGACAGCGA TCCGCTGAAG
GACGAAGCGC CCATCTTCAA GACCGTGCCG ATGATCGTGC TGACCAACGC GTACTCCGCG
TCGGCGTCGG AAATCGTCGC GGGCGCGCTG CAGGATCAGC ACCGTGCGCT GATCGTCGGC
AAGACCACCT TCGGCAAAGG TTCGGTGCAG ACCGTGCGGC CCATGACGGC GGACACGGCA
CTGCGTCTGA CCACGGCGTA CTACTACACG CCGAGCGGCC GTTCGATCCA GAACAAAGGC
ATCCGCCCTG ACATCGCGGT CGACCAATAC GCGGAAGGCG ATCCGGACGA CGCGCTCGTC
ACCCGCGAAG TCGACTACTC GAATCACCTT GCGAATACGC AGGACCCGAA CGAGAAGAAG
GAAGCGGAAC AGCGCGAACA GGAACGCATG GACCAGTTGC GCCAGCTTGA AGAGCAGAAC
GACAAGAAGA CGCCGGAACA GCGTCAGAAG GATCGTGAGC GCAAGCCGGT GGAATTCGGT
TCGGCCGACG ACTTCATGCT GCAACAGGCT CTGAACAAGC TGGAAGGCAA GCCGGTGCAG
GAGTCGAAGT CGCTGACCGA GCGTCGTCTC GCGCAGAACA AGCCACCGGC GTCGGCTTCC
GCGCCGGTCG CGGTCAAGCC CACGCAACCG GTGCCCGGTG CATCGGCTCC GGCCTCGGCG
CCTGCTACGC CAAGCAACTA A
|
|---|
| Protein sequence | MRKNLKNIGL IAAGLATGVF ATLQLSASAQ QPASAASSAV APLPLDQLRL FAEVFGQIKH
EYVEPVDDKK LLTAAIKGMV SSLDPHSSYL DKTDYEELQE QTKGRFAGLG IEISSEDGLI
KVISPIEDTP AFRAGIRPGD LITRINDKPV RGMTLDQAVK QMRGDPGTKV TLTIFRKTDD
RTFPLTVTRA IIKVQSVKMK ILAPGYAYVR ITSFQERTTP DLAAKLQDIA RQQPNLKGLV
LDLRNNGGGL LQSAVGVAGA FLPPNSVVVS TNGQIPDSKQ VYRDTYDNYR LQSFDSDPLK
DEAPIFKTVP MIVLTNAYSA SASEIVAGAL QDQHRALIVG KTTFGKGSVQ TVRPMTADTA
LRLTTAYYYT PSGRSIQNKG IRPDIAVDQY AEGDPDDALV TREVDYSNHL ANTQDPNEKK
EAEQREQERM DQLRQLEEQN DKKTPEQRQK DRERKPVEFG SADDFMLQQA LNKLEGKPVQ
ESKSLTERRL AQNKPPASAS APVAVKPTQP VPGASAPASA PATPSN
|
|---|
| |