| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4054 |
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| Symbol | |
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| ID | 4002215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 450764 |
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| End bp | 452371 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637945597 |
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| Product | threonine dehydratase |
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| Protein accession | YP_556997 |
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| Protein GI | 91781791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.536214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAGC CGAAGGCCTT GGCGCACACC GTTGGCGCTA TCATTGACCC TTTCCGGTCT
CACACAGCGC TCCGCGCCAC CCGCATGGCC TCCCACGACT ACCTGAAGAA AACCCTGACC
GCGCGCGTCT ACGACGTCGC CCGCGAGACC GAACTCGAAC GCGCGCCGAA TCTGTCTGCA
CGTCTGCGCA ATCCGGTCTA CCTGAAGCGC GAGGACAACC AGCCGGTGTT CTCGTTCAAG
GTGCGCGGCG CGTACAACAA GATGGCGCAT ATTCCGGCCG AGGCGCTGGA ACGCGGGGTG
ATCACCGCGT CGGCGGGCAA TCATGCGCAG GGCGTCGCGC TGTCGGCCGC GCGCATGGGC
GTGAAGGCGA TCATCGTGGT GCCGGTCACC ACGCCGCAGG TGAAGGTCGA TGCAGTGCGA
GCACACGGCG GCCCGACCGT CGAAGTGGTG CAGTTCGGCG AATCGTATAG CGACGCGTAT
GGCCATGCGG TGAAACTGCA GGAAGAGCGC GACCTGACCT TCGTGCATCC GTTCGACGAT
CCGTACGTGA TCGCCGGACA GGGCACGGTG GCAATGGAGA TCCTGAGCCA GCACCAGGGG
CCTATTCACG CGATCTTCGT GCCGATCGGC GGCGGCGGAC TCGCGGCAGG CGTGGCCGCG
TATGTGAAAT CGGTGCGGCC CGAGATCAAG GTGATCGGCG TGCAGACCGA TGATTCGTGC
GCGATGGCCG CATCGCTGAA AGCCGGCGAG CGGGTCACGC TGAACGAAGT CGGCCTGTTC
TCGGACGGCA CGGCGGTGAA ACTGGTCGGC GAAGAAACCT TCCGCCTCTG CCGCGAATAT
CTCGACGACG TGCTGCTCGT GGACACCGAC GCGCTATGCG CCGCCATCAA GGACGTGTTC
CAGGACACCC GCAGCGTGCT GGAACCCGCC GGCTCGCTCG CGGTGGCCGG GGCGAAACAG
TATGCGGAGC GCGAAGGCAT CGAGAACCAG ACGCTGATCG CGATCACATC GGGCGCGAAC
ATGAACTTCG ACCGCATGCG CTTCGTGGCC GAGCGCGCCG AAGTCGGCGA AGCGCGTGAA
GCCGTGTTCG CCGTGACGAT CCCCGAAGAG CGCGGCAGTT TCCGGCGTTT CTGCGAACTG
GTGGGCACGC GCAGCGTCAC CGAGTTCAAC TACCGGATTG CGGACGCGAA TTCCGCCCAT
ATCTTCGTGG GCGTGCAGAT CAGGAATCGC AGCGAATCCG CGCAGATCGC GGGGGCGTTC
GAAGCGCACG GCTTCGCCAC CGTCGATCTG ACTTTCGACG AACTGTCCAA GCAGCACATC
CGTTACATGG TAGGCGGCCG CTCGCCTCTG GCGCACGACG AACGGCTGTT CCGCTTCGAG
TTTCCCGAAC GTCCGGGCGC GCTGATGAAA TTCCTTTCGT CGATGGCGCC GAACTGGAAT
ATCAGCCTGT TCCACTATCG CAACCAGGGC GCGGACTATA GCTCGATTCT GGTCGGCATC
CAGGTGCCGG AGAGCGAGGA TGCGGCGTTC GACCAGTTTC TCGCCACGCT CGGCTATCCG
AACTGGGAAG AGACGCGCAA CCCGGTGTAT CGCCTGTTTC TCGCTTGA
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| Protein sequence | MHKPKALAHT VGAIIDPFRS HTALRATRMA SHDYLKKTLT ARVYDVARET ELERAPNLSA
RLRNPVYLKR EDNQPVFSFK VRGAYNKMAH IPAEALERGV ITASAGNHAQ GVALSAARMG
VKAIIVVPVT TPQVKVDAVR AHGGPTVEVV QFGESYSDAY GHAVKLQEER DLTFVHPFDD
PYVIAGQGTV AMEILSQHQG PIHAIFVPIG GGGLAAGVAA YVKSVRPEIK VIGVQTDDSC
AMAASLKAGE RVTLNEVGLF SDGTAVKLVG EETFRLCREY LDDVLLVDTD ALCAAIKDVF
QDTRSVLEPA GSLAVAGAKQ YAEREGIENQ TLIAITSGAN MNFDRMRFVA ERAEVGEARE
AVFAVTIPEE RGSFRRFCEL VGTRSVTEFN YRIADANSAH IFVGVQIRNR SESAQIAGAF
EAHGFATVDL TFDELSKQHI RYMVGGRSPL AHDERLFRFE FPERPGALMK FLSSMAPNWN
ISLFHYRNQG ADYSSILVGI QVPESEDAAF DQFLATLGYP NWEETRNPVY RLFLA
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