Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A4043 |
Symbol | aspS |
ID | 4002226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 464088 |
End bp | 465887 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637945608 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_557008 |
Protein GI | 91781802 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0426746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.173389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATGA GATCTGAATA CTGCGGTCTG GTGACCGAAG AACTGCTGGG CCAATCCGTC TCGCTGTGCG GCTGGGTGAG CCGCCGCCGC GACCACGGCG GCGTCATCTT CATCGACCTG CGCGATCGCG AAGGCCTCGT TCAGGTCGTC TGCGACCCGG ACCGCGCGGA GATGTTCAAG GCGGCCGAAG GCGTGCGCAA CGAGTTCTGC CTGCAGATCA AGGGCGTGGT TCGCGCCCGT CCGGAAGGCA CCACGAACGC TGCGCTGAAG AGCGGCAAGA TCGAAGTGCT GTGCCACGAG CTGATCGTGC TGAACCCGTC GATCACGCCG CCGTTCCAGC TCGACGACGA CAACCTGTCG GAAACCACGC GCCTCACGCA CCGCGTGCTG GACCTGCGCC GTCCGCAGAT GCAGCACAAC CTGCGTCTGC GTTACCGCGT CGCGATCGAA GTGCGCAAGT ACCTGGACGC GCAAGGCTTC ATCGACATCG AAACGCCGAT GCTCACCAAG AGCACGCCGG AAGGCGCGCG CGACTACCTG GTGCCGTCGC GTACGAACCC GGGCCAGTTC TTCGCGCTGC CGCAATCGCC GCAGCTGTTC AAGCAGTTGC TGATGGTGGC GAACTTCGAT CGCTACTACC AGATCGTCAA GTGCTTCCGC GACGAAGATC TGCGCGCCGA CCGTCAGCCG GAATTCACGC AGATCGACTG CGAAACCTCG TTCCTGTCGG AACAGGAAAT CCGCGATCTG TTCGAAGCGA TGATCCGTCA CGTGTTCAAG GAAACGATCG GCGTCACGCT GGACGAGAAA TTCCCGGTCA TGCTGTATTC GGAAGCCATG CGCCGCTTCG GTTCGGACAA GCCGGACCTG CGCGTGAAGC TCGAATTCAC GGACCTCACG GACGCCGTTC GCGACGTCGA CTTCAAGGTG TTCAGCACGC CGGCCAACAC GAAAGACGGC CGTGTCGCGG CGATTCGCGT GCCGAAGGGC GGCGAGCTCT CGCGTGGCGA CATCGACAGC TACACGGAAT TCGTGCGCAT CTACGGTGCG AAGGGTCTGG CGTGGATCAA GGTCAACGAA GTCGCGAAGG GCCGTGACGG TCTGCAAAGC CCGATCGTCA AGAACCTGCA CGACGAAGCG GTGAAGGCGA TCATCGAGCG CACCGGCGCG CAGGACGGCG ACATCATTTT CTTCGCGGCG GATCGCGCGA AAGTGGTGAA CGACAGCCTC GGCGCGCTGC GTCTGAAGAT CGGTCATTCG GAATTCGGCA AGGCCAATGG TCTGGTGGAA AGCGGCTGGA AGCCGCTGTG GGTGATCGAC TTCCCCATGT TCGAATACGA CGAGGAAGAC AACCGCTACG TCGCCGCGCA TCACCCGTTC ACGAGCCCGA AAGACGAGCA CCTCGAGTAT CTGGAAACGG ATCCGGCGCG CTGCCTCGCG AAGGCCTACG ACATGGTGCT GAACGGCTGG GAAATCGGCG GCGGTTCGGT GCGTATCCAC CGTGAAGAAG TGCAGAGCAA GGTGTTCCGC GCGCTGAAGA TCAACGCGGA AGAAGCGCAG GCCAAGTTCG GCTTCCTGCT CGACGCGCTG CAATACGGCG CGCCGCCGCA CGGCGGTATC GCATTTGGTC TCGACCGCAT CGTCACGATG ATGGCCGGCG CCGATTCGAT CCGCGACGTG ATCGCGTTCC CGAAAACGCA GCGCGCGCAG TGTCTGCTGA CGCAGGCGCC GAGCGAAGTG GACGAGCGCC AGTTGCGCGA GTTGCACATT CGTCTGCGCC AGCCGGAACC GAAGGCGTAA
|
Protein sequence | MSMRSEYCGL VTEELLGQSV SLCGWVSRRR DHGGVIFIDL RDREGLVQVV CDPDRAEMFK AAEGVRNEFC LQIKGVVRAR PEGTTNAALK SGKIEVLCHE LIVLNPSITP PFQLDDDNLS ETTRLTHRVL DLRRPQMQHN LRLRYRVAIE VRKYLDAQGF IDIETPMLTK STPEGARDYL VPSRTNPGQF FALPQSPQLF KQLLMVANFD RYYQIVKCFR DEDLRADRQP EFTQIDCETS FLSEQEIRDL FEAMIRHVFK ETIGVTLDEK FPVMLYSEAM RRFGSDKPDL RVKLEFTDLT DAVRDVDFKV FSTPANTKDG RVAAIRVPKG GELSRGDIDS YTEFVRIYGA KGLAWIKVNE VAKGRDGLQS PIVKNLHDEA VKAIIERTGA QDGDIIFFAA DRAKVVNDSL GALRLKIGHS EFGKANGLVE SGWKPLWVID FPMFEYDEED NRYVAAHHPF TSPKDEHLEY LETDPARCLA KAYDMVLNGW EIGGGSVRIH REEVQSKVFR ALKINAEEAQ AKFGFLLDAL QYGAPPHGGI AFGLDRIVTM MAGADSIRDV IAFPKTQRAQ CLLTQAPSEV DERQLRELHI RLRQPEPKA
|
| |