| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4032 |
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| Symbol | |
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| ID | 4004330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 479118 |
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| End bp | 482228 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637945619 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_557019 |
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| Protein GI | 91781813 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.661545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTT TTCTATCGAA GCGGCTGCTG ATCAACCTGG CGGTCGTCGC CGCGGCGGTC
GGCGCGAACG CGTTCGTCGC CTACGCGCAG ATTTGCGGCC AACGCGACGC CGACGCACGC
ATGCTGCGGT CGACGAGCGT GCGCCAGAAC CTCGACGCCT ACCAGTCGGC GCTCGACGGC
GGCCTTGCCG CGCTCGGCCG CTTCGAGACG TCGGGCGAGT CCGCGCCGGC CGGCGCGGCG
ACCAGCATGG CCGCGACGCT CACGCGTCTG GAGAGCGACC TGCGCGGCGA ACTTGCCGGC
GACCCCGCCA TGCTCGACGC GCTCGCCAGG CTGAGCGCGG ACAGCCATGC GTTGCAACAC
GACATCGACG ACGCGCTGCT GAGGAGCGCC GACTCCGGCG CGAGCGCCTC GCGTCCGTGG
GCGGCCTCGA CCTATACCCA TCTCGGGCTC GGCATGCACC GCGTCGAAGC CGCGCTGGCC
GCGCTGCGCG GCGAGGAGAA CCGCGCGTTG CGGGCCTCGC TCGCGGCGTC GGCGAGCGAA
ACCCAGCGGG CCATGTTCCT GCTGATCGTG ACGATGCTGG CCGGCAGCGT GCTGCTGATC
TACACGTTCG GCGCCCGTGA AAGCAGCGCG CGCGAGAAGC TGCGCACCGT TCGCGCGCTC
GGCCGCAACG ACGAACGTTT TCGCGGCCTG TTCGACGACC ATCCGGTGCC GATGTATATC
GTCGATCGCG AGACGTTGCG CTTTCTCGCC GTCAACGCGG CCGCGATCCA GCAATACGGC
TATTCCGAAA GCGAATTTCT CGGCATGACG ATCCGCGCGA TCCGGCCGAA AGCCGAGATC
TCGCGTCTCG AATCGCATCT TCAGCGTAGC GACGCGACCC ACCACGGCCG CACGATGGCG
GGCATCTGGC ATCACCGGCG CAAGGACGGC TCGACGATCA GCGCCGACAT TTCGTATCAC
GCGCTGAACT TCATGGGCCG CGCCGCATTC TTCGTGCTGG CCGACGACGT CACCGACCAG
ATCAACGCCG AAGCCGAAGC GCAGCGTTCG AACCAGATGC TCGAAGCGGT GATCGACAAT
ATTCCGCAGC GCATTTTCTG GAAGGACCTG GAGTCGCGCT ATCTCGGCTG CAACATGGCG
TTCGCGCGCG ACGCCGGACT CGCGTATCCC GAGCAGGTGG TGGGCAAGAG CGACGCCGAC
ATGCCGTGGC GCGACTTCTC CAGCCTGCTG AACGACCACG ACAGGGAAGT GGCGAGCACC
GGCGTGCCGA AGATGAATTT CGAAGTCGAT CTGATGATCG ACGGCGTGCA CCGCACCACC
GTCACGAGCA AGCTGCCGTT CACCGACGGC GACGGCCGCG TAATCGGCGT GCTCGGTTCG
TACACGGATA TCACCGAGCG CAAGCGCGCC GACCTTGCGT TGCGCCTGCA AAGCCGCGCG
CTCGATGCGA GCGTCAACGC GATTCTGATC ACCGCGCCGT CGCCGGCCGG CAATCTGATC
GAGTACGTGA ACCCGGCGTT CATGCGCATT ACCGGCTACG ACGCCGCCGA GGCGATCGGC
CACGATTGCC GCCTGCTACA GCGCGACGAT CGCGACCAGG AAGGCGTCGC GCTGATCCGC
CAGGCGCTCG CCGCGAACCG CGAAGTGAGC GCCGTGGTGC GCAACTATCG CAAGGACGGC
GCGTTGTTCT GGAATCAGCT CTTCATCGCG CCAGTGCCGG ATCAGGACGG CGTGATCACG
CATCACATCG GCGTGATCAA CGACGTGACC GATCTGATGC GCTATCAGGA ACAGCTCGAA
TATCAGGCCA ACTACGACAG CCTGACGCGC CTGCCGAACC GCAATCTGCT GCGCGACCGT
CTGCAGCACG CGTTGATCGT CGCGCAGCGG CATCACAAGG GCGTCGCGGT GGTGTTCATC
GACCTGGACG GCTTCAAGAA CGTCAACGAC AGCCTCGGCC ACAGCGTGGG CGACCGGCTG
CTGAGCGTGG TTGCCGAGCG CCTGGCACGT TGCACGCGCA CGAGCGATAC GGTGGCGCGG
CACGGCGGCG ACGAGTTCGT GATCGTGATG ACCGATACCG TCGACGAAAA GTCGCTGATC
GCGTGGATGG AGCGCGTGCG CGTGTCGATC TCCGAGCCGG TCTGGCTCGA CGGCACCGAG
CTGTACGTTG GTTGCAGCAT GGGCGCGAGC CTGTTCCCGC AAGACGGCGA AGACGCCGAA
ACGCTGATGA AGAAGGCCGA TCTGGCGATG TATCGCGCCA AGGACATGGG CCGCAATACG
TTCCAGTTCT ATCAGCCGGA AATGAACGCG AGCGCGGGCA CACGTCTGAA TCTCGAACGG
CGCTTGCGCC GCGCGCTGCG CGACAACCAG TTCCTGCTGC ACTACCAGCC GCAGGTGGAT
ATCGTGAGCG GACAGATCGT CGGCACCGAG GCGCTGGTGC GCTGGCGCGA TCCGGAAGTC
GGACTGGTGC CGCCGTCGTC GTTCATTCCG GTGGCGGAAG AAAGCGGGCT GATCGGGCCG
CTCTCGGAGT GGGTGCTGCG TGAGGCGTGC CGCCAGAACA AGGCCTGGCA GGACGAAGGC
TTGCCGCCGG CGCGCGTCTC GGTGAATCTG TCCGCGCGCG TGTTCCAGCA GCGCGATATC
GCCAAGCTGG TCATGCAGGT GCTGGACGAG ACTGGCCTGG AGCCGCAATA CCTCGAACTC
GAGCTGACCG AAAGCACCAT CATGCGCAAT GCCGAAGAAG CCGTGTCGAT GCTCAACGAG
CTGCACGCGC TCGGCATTGG CCTTGCCATC GACGACTTCG GCACCGGCTA TTCGAGTCTC
AGCTATCTGA AGCGCTTCCC GGTGGACCGC CTGAAGATCG ACCGCTCGTT CGTCTCCGAC
ATTGGCATAT CGGGCGACGA CGAAACGATC ACCTCGGCGA TCATCGCGCT CGCGCACTCG
CTGAAATTGC AGGTGATCGC CGAAGGCGTG GAGACGTCCG CGCAGCTCGA CTTCCTGAAA
GAGCGCGCGT GCGACGAAAT GCAGGGCTTC TACTTTGCAA AGCCGTTGTC GACGGACGCC
ATTTCCGAAC TGCTGCAGGG TGGCGTGGGG CGCGAACTGG CCACAGTGTG A
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| Protein sequence | MTPFLSKRLL INLAVVAAAV GANAFVAYAQ ICGQRDADAR MLRSTSVRQN LDAYQSALDG
GLAALGRFET SGESAPAGAA TSMAATLTRL ESDLRGELAG DPAMLDALAR LSADSHALQH
DIDDALLRSA DSGASASRPW AASTYTHLGL GMHRVEAALA ALRGEENRAL RASLAASASE
TQRAMFLLIV TMLAGSVLLI YTFGARESSA REKLRTVRAL GRNDERFRGL FDDHPVPMYI
VDRETLRFLA VNAAAIQQYG YSESEFLGMT IRAIRPKAEI SRLESHLQRS DATHHGRTMA
GIWHHRRKDG STISADISYH ALNFMGRAAF FVLADDVTDQ INAEAEAQRS NQMLEAVIDN
IPQRIFWKDL ESRYLGCNMA FARDAGLAYP EQVVGKSDAD MPWRDFSSLL NDHDREVAST
GVPKMNFEVD LMIDGVHRTT VTSKLPFTDG DGRVIGVLGS YTDITERKRA DLALRLQSRA
LDASVNAILI TAPSPAGNLI EYVNPAFMRI TGYDAAEAIG HDCRLLQRDD RDQEGVALIR
QALAANREVS AVVRNYRKDG ALFWNQLFIA PVPDQDGVIT HHIGVINDVT DLMRYQEQLE
YQANYDSLTR LPNRNLLRDR LQHALIVAQR HHKGVAVVFI DLDGFKNVND SLGHSVGDRL
LSVVAERLAR CTRTSDTVAR HGGDEFVIVM TDTVDEKSLI AWMERVRVSI SEPVWLDGTE
LYVGCSMGAS LFPQDGEDAE TLMKKADLAM YRAKDMGRNT FQFYQPEMNA SAGTRLNLER
RLRRALRDNQ FLLHYQPQVD IVSGQIVGTE ALVRWRDPEV GLVPPSSFIP VAEESGLIGP
LSEWVLREAC RQNKAWQDEG LPPARVSVNL SARVFQQRDI AKLVMQVLDE TGLEPQYLEL
ELTESTIMRN AEEAVSMLNE LHALGIGLAI DDFGTGYSSL SYLKRFPVDR LKIDRSFVSD
IGISGDDETI TSAIIALAHS LKLQVIAEGV ETSAQLDFLK ERACDEMQGF YFAKPLSTDA
ISELLQGGVG RELATV
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