Gene Bxe_A4010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4010 
SymbolmnmA 
ID4003397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp506142 
End bp507287 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID637945641 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_557041 
Protein GI91781835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGAAAGTCGT AGTAGGCATG TCGGGCGGCG TCGATTCGTC GGTCACCGCG 
TGGCTGCTGA AGGAACAGGG CTACGACGTG GTCGGCCTGT TCATGAAAAA CTGGGAAGAC
GACGACGACA GCGAGTACTG CTCGACGCGG CAGGACTGGA TCGACGTGGT CTCGGTGGCG
GACCTGATCG GCATCGACGT CGAAGCGGTC AACTTCGCCG CCGAATACAA GGACCGCGTG
TTCGCCGAAT TCCTGCGCGA ATATTCGGCC GGCCGCACGC CGAATCCGGA CGTGCTCTGC
AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GATCACGCCA TGTCGCTTGG CGCGCAAACC
ATCGCGACCG GCCACTACGC GCGCGTGCGC GAGAACAACG GCCGCTTCGA GCTGCTGAAG
GCGCTCGACC ATACGAAAGA TCAGTCGTAC TTCCTGCATC GGCTGAATCA GGCGCAGTTG
TCGAAAACGC TGTTTCCGCT CGGCGAAATT CCGAAAACCA GAGTGCGCGA AATCGCCGAA
CAGATCGCGC TGCCCAATGC GAAGAAGAAA GATTCGACCG GCATCTGCTT TATCGGCGAA
CGGCCGTTCC GCGACTTCCT GAACCGCTAT CTGCCCACCA AGCCCGGCCC GATGAAAACC
ACCGAGGGCA AAGTGGTCGG CGAACATATC GGCCTCGCGT TCTACACGTT TGGGCAGCGC
AAGGGCATCG GACTCGGCGG CAGCAAGGAC GGCAGCGGCG AGCCGTGGTT CGTGGCCGGC
AAGGACATCC CGTCGAACAC GCTGTACGTC GCGCAAGGCC ACGATCATCC GTGGCTGCTC
AGCCATACGC TGTCAGCGGG CAACACGAGC TGGGTGGCGG GCGAGCCGCC GGCGGACGGC
TTTGCGTGCG GCGCGAAAAC CCGTTACCGG CAAGCGGACG CGCCGTGCAC GTTCAGCTCG
GCGGGAGCCG GCGAAGGCCT GTTCGAACTG AATTTCGACG TGGCGCAATG GGCTGTCACA
CCAGGGCAAT CCGCCGTGCT CTACGATGGC GACGTGTGCC TGGGCGGCGG CATCATCGAA
CATGCGGTGA CCGGCCAGCC GGCCACACGA CAGCCTCAGA AAGCGGCGCT GCTGACCGCC
CGTTGA
 
Protein sequence
MSKQKVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDSEYCSTR QDWIDVVSVA 
DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLGAQT
IATGHYARVR ENNGRFELLK ALDHTKDQSY FLHRLNQAQL SKTLFPLGEI PKTRVREIAE
QIALPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT TEGKVVGEHI GLAFYTFGQR
KGIGLGGSKD GSGEPWFVAG KDIPSNTLYV AQGHDHPWLL SHTLSAGNTS WVAGEPPADG
FACGAKTRYR QADAPCTFSS AGAGEGLFEL NFDVAQWAVT PGQSAVLYDG DVCLGGGIIE
HAVTGQPATR QPQKAALLTA R