Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A4010 |
Symbol | mnmA |
ID | 4003397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 506142 |
End bp | 507287 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637945641 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_557041 |
Protein GI | 91781835 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGAAAGTCGT AGTAGGCATG TCGGGCGGCG TCGATTCGTC GGTCACCGCG TGGCTGCTGA AGGAACAGGG CTACGACGTG GTCGGCCTGT TCATGAAAAA CTGGGAAGAC GACGACGACA GCGAGTACTG CTCGACGCGG CAGGACTGGA TCGACGTGGT CTCGGTGGCG GACCTGATCG GCATCGACGT CGAAGCGGTC AACTTCGCCG CCGAATACAA GGACCGCGTG TTCGCCGAAT TCCTGCGCGA ATATTCGGCC GGCCGCACGC CGAATCCGGA CGTGCTCTGC AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GATCACGCCA TGTCGCTTGG CGCGCAAACC ATCGCGACCG GCCACTACGC GCGCGTGCGC GAGAACAACG GCCGCTTCGA GCTGCTGAAG GCGCTCGACC ATACGAAAGA TCAGTCGTAC TTCCTGCATC GGCTGAATCA GGCGCAGTTG TCGAAAACGC TGTTTCCGCT CGGCGAAATT CCGAAAACCA GAGTGCGCGA AATCGCCGAA CAGATCGCGC TGCCCAATGC GAAGAAGAAA GATTCGACCG GCATCTGCTT TATCGGCGAA CGGCCGTTCC GCGACTTCCT GAACCGCTAT CTGCCCACCA AGCCCGGCCC GATGAAAACC ACCGAGGGCA AAGTGGTCGG CGAACATATC GGCCTCGCGT TCTACACGTT TGGGCAGCGC AAGGGCATCG GACTCGGCGG CAGCAAGGAC GGCAGCGGCG AGCCGTGGTT CGTGGCCGGC AAGGACATCC CGTCGAACAC GCTGTACGTC GCGCAAGGCC ACGATCATCC GTGGCTGCTC AGCCATACGC TGTCAGCGGG CAACACGAGC TGGGTGGCGG GCGAGCCGCC GGCGGACGGC TTTGCGTGCG GCGCGAAAAC CCGTTACCGG CAAGCGGACG CGCCGTGCAC GTTCAGCTCG GCGGGAGCCG GCGAAGGCCT GTTCGAACTG AATTTCGACG TGGCGCAATG GGCTGTCACA CCAGGGCAAT CCGCCGTGCT CTACGATGGC GACGTGTGCC TGGGCGGCGG CATCATCGAA CATGCGGTGA CCGGCCAGCC GGCCACACGA CAGCCTCAGA AAGCGGCGCT GCTGACCGCC CGTTGA
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Protein sequence | MSKQKVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDSEYCSTR QDWIDVVSVA DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLGAQT IATGHYARVR ENNGRFELLK ALDHTKDQSY FLHRLNQAQL SKTLFPLGEI PKTRVREIAE QIALPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT TEGKVVGEHI GLAFYTFGQR KGIGLGGSKD GSGEPWFVAG KDIPSNTLYV AQGHDHPWLL SHTLSAGNTS WVAGEPPADG FACGAKTRYR QADAPCTFSS AGAGEGLFEL NFDVAQWAVT PGQSAVLYDG DVCLGGGIIE HAVTGQPATR QPQKAALLTA R
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