| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3993 |
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| Symbol | secF |
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| ID | 4002082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 523885 |
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| End bp | 524835 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637945658 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_557058 |
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| Protein GI | 91781852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.117459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGTTTCCG CAAAGACATT CCGTTCATGC AGCGCGCGTT GATTTTCAAC
GCCATCTCGC TGCTAACGTT CCTTGCTGCT GTGTTCTTCC TGCTGCATCG CGGGCTGCAT
CTGTCGGTGG AGTTCACCGG CGGTACGGTG ATCGAAGTGC AGTATCCGGG CGCCGCGCCG
CTCGAACCGG TGCGCGGCAC GCTGGGCAAG CTCGGTTACG CCGACGCCCA GGTGCAGAAC
TTCGGCACCT CGCGCGACGT GCTGATCCGT CTGCCGCTCA AGCAGGGCTA TACGTCCGCG
CAACAGAGCG ACCAGGTGAT GAGCGCGCTG AAGGCCGATA CCCCGCAGGT GCAACTGCAG
CGTGTCGAGT TCGTCGGCCC GCAGGTCGGC AAGGAGCTCG CCACCGACGG CCTGCTTGCG
CTCGCCTGTG TGGTGATCGG CATCGTGATC TACCTGTCGT TCCGCTTCGA ATGGAAGTAC
GCGGTGGCCG GCGTGATCGC GAACCTGCAC GACGTGATCA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCCGCGG TGCTTGCGGT GCTCGGCTAT
TCGGTGAACG AATCGGTCGT TATCTTCGAC CGGATTCGCG AGACCTTCCG CCGCGAACGC
AAGCTGAGCG TGATCGAAGT CATCAACCAC GCGATAACCA GCACGATGTC GCGAACCATC
ATCACCCACG GCTGTACGCA GATGATGGTG CTCTCGATGT TCCTGTTCGG CGGCCCGACG
CTGCACTACT TCGCTCTCGC GCTGACGGTC GGTATTCTGT TCGGTATCTA CTCGTCAGTG
TTCGTCGCCG CGGCGCTCGC CATGTGGTTC GGCGTGAAGC GCGAAGATCT GATCAAGGAC
AGGAAGGAAC GCACCGACGC GGACGATCCG AACGCAGGCG CGCAAGTCTG A
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| Protein sequence | MEFFRFRKDI PFMQRALIFN AISLLTFLAA VFFLLHRGLH LSVEFTGGTV IEVQYPGAAP
LEPVRGTLGK LGYADAQVQN FGTSRDVLIR LPLKQGYTSA QQSDQVMSAL KADTPQVQLQ
RVEFVGPQVG KELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGVIANLH DVIIILGFFA
FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KLSVIEVINH AITSTMSRTI
ITHGCTQMMV LSMFLFGGPT LHYFALALTV GILFGIYSSV FVAAALAMWF GVKREDLIKD
RKERTDADDP NAGAQV
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