Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3952 |
Symbol | |
ID | 4002278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 576000 |
End bp | 577151 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637945699 |
Product | hypothetical protein |
Protein accession | YP_557099 |
Protein GI | 91781893 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00873367 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGATTTT ACCCGATGCC GGCCCACTGG CTGGAATTTG AATCATCCGG TCCCGACGAC ACCTGGGAAA CAACCTTGCA AGAGAACTCC TCGATTCTGA CGCCGGTCCA GCGCCGCGCC TTCACCTGGC TGGCCATTGC GCTGGGCATC GGCATTCTGC TCTGGCTGCT GAGTCCGGTC CTCACGCCGT TTCTGCTCGG TGCGATTCTC GCGTACATTC TGCAGCCGGG CGTCGCGTGG ATGGTGCGCC GGCGCGTGCC GCGCGGTCTG GCGGCGTTGG TGATGATGCT GTTCTTCACG TTGCTGATGA CGCTGCTCGT CCTGCTGGTG CTGGCCGTCG TGCAGAAAGA AGGGCCGCAA CTGCGGCAGC AGGTGCCCGT GCTGTTCGCG CATGCGAATG CGTGGCTGCA ACCCAAGCTG GCCTTGCTGG GACTGGCCGA TTCGCTCGAT TTCGCCAGCA TCCGCGATAT GGTGATGGGG CAGCTAGAAG GCAGCGCGCA GACCGTGGCA CTGTATGCAT GGACCTCCAT CCGCACGAGC GGCAATGTGA TGATAACGGT GGTCGGCAAC GTGGTGATGG TGCCGCTCGT GCTGTTCTAC CTGCTGTACG ACTGGAACCG CATGCTCGCC CGCATGCAGA CCGTGGTGCC GCGCCGCTGG CTCGACAAGA CGCTGCAACT CGCGCACGAC ATGGACCAGA TGCTGTCGCA ATACCTGCGC GGCCAGTTGC TCGTGATGGG CGTGCTCGCC GCGTATTACG CCATCGCGCT GAGCCTCGCG CGCTTCGAGA TCGCGTTGCC GGTCGGCATT TTTACGGGGC TCGCGGTGTT CATCCCGTAC ATCGGCTTTG CGACCGGTCT CGCGTTGGCG CTCCTCGCGG CGCTGCTGCA ATTCGGCGAC TGGTACGGCT TCGGCGCGGT TGCGCTGATC TACGGCGTCG GCCAGATCCT GGAGAGCTTT TTTCTCACGC CGCGCCTCGT GGGCGAACGG ATCGGCCTGC ACCCGCTCGC GGTGATTTTC GCGTTGCTCG CGTTCGGGCA ACTGTTCGGC TTTTTCGGCG TTTTGCTGGC ACTGCCGGTC AGCGCGATTC TGTCGGTCGC CACGCGCGAG CTGCGGCAAA GCTATCTGGC GAGCTCGCTT TATAAAAACT GA
|
Protein sequence | MRFYPMPAHW LEFESSGPDD TWETTLQENS SILTPVQRRA FTWLAIALGI GILLWLLSPV LTPFLLGAIL AYILQPGVAW MVRRRVPRGL AALVMMLFFT LLMTLLVLLV LAVVQKEGPQ LRQQVPVLFA HANAWLQPKL ALLGLADSLD FASIRDMVMG QLEGSAQTVA LYAWTSIRTS GNVMITVVGN VVMVPLVLFY LLYDWNRMLA RMQTVVPRRW LDKTLQLAHD MDQMLSQYLR GQLLVMGVLA AYYAIALSLA RFEIALPVGI FTGLAVFIPY IGFATGLALA LLAALLQFGD WYGFGAVALI YGVGQILESF FLTPRLVGER IGLHPLAVIF ALLAFGQLFG FFGVLLALPV SAILSVATRE LRQSYLASSL YKN
|
| |