Gene Bxe_A3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3952 
Symbol 
ID4002278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp576000 
End bp577151 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID637945699 
Producthypothetical protein 
Protein accessionYP_557099 
Protein GI91781893 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00873367 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATTTT ACCCGATGCC GGCCCACTGG CTGGAATTTG AATCATCCGG TCCCGACGAC 
ACCTGGGAAA CAACCTTGCA AGAGAACTCC TCGATTCTGA CGCCGGTCCA GCGCCGCGCC
TTCACCTGGC TGGCCATTGC GCTGGGCATC GGCATTCTGC TCTGGCTGCT GAGTCCGGTC
CTCACGCCGT TTCTGCTCGG TGCGATTCTC GCGTACATTC TGCAGCCGGG CGTCGCGTGG
ATGGTGCGCC GGCGCGTGCC GCGCGGTCTG GCGGCGTTGG TGATGATGCT GTTCTTCACG
TTGCTGATGA CGCTGCTCGT CCTGCTGGTG CTGGCCGTCG TGCAGAAAGA AGGGCCGCAA
CTGCGGCAGC AGGTGCCCGT GCTGTTCGCG CATGCGAATG CGTGGCTGCA ACCCAAGCTG
GCCTTGCTGG GACTGGCCGA TTCGCTCGAT TTCGCCAGCA TCCGCGATAT GGTGATGGGG
CAGCTAGAAG GCAGCGCGCA GACCGTGGCA CTGTATGCAT GGACCTCCAT CCGCACGAGC
GGCAATGTGA TGATAACGGT GGTCGGCAAC GTGGTGATGG TGCCGCTCGT GCTGTTCTAC
CTGCTGTACG ACTGGAACCG CATGCTCGCC CGCATGCAGA CCGTGGTGCC GCGCCGCTGG
CTCGACAAGA CGCTGCAACT CGCGCACGAC ATGGACCAGA TGCTGTCGCA ATACCTGCGC
GGCCAGTTGC TCGTGATGGG CGTGCTCGCC GCGTATTACG CCATCGCGCT GAGCCTCGCG
CGCTTCGAGA TCGCGTTGCC GGTCGGCATT TTTACGGGGC TCGCGGTGTT CATCCCGTAC
ATCGGCTTTG CGACCGGTCT CGCGTTGGCG CTCCTCGCGG CGCTGCTGCA ATTCGGCGAC
TGGTACGGCT TCGGCGCGGT TGCGCTGATC TACGGCGTCG GCCAGATCCT GGAGAGCTTT
TTTCTCACGC CGCGCCTCGT GGGCGAACGG ATCGGCCTGC ACCCGCTCGC GGTGATTTTC
GCGTTGCTCG CGTTCGGGCA ACTGTTCGGC TTTTTCGGCG TTTTGCTGGC ACTGCCGGTC
AGCGCGATTC TGTCGGTCGC CACGCGCGAG CTGCGGCAAA GCTATCTGGC GAGCTCGCTT
TATAAAAACT GA
 
Protein sequence
MRFYPMPAHW LEFESSGPDD TWETTLQENS SILTPVQRRA FTWLAIALGI GILLWLLSPV 
LTPFLLGAIL AYILQPGVAW MVRRRVPRGL AALVMMLFFT LLMTLLVLLV LAVVQKEGPQ
LRQQVPVLFA HANAWLQPKL ALLGLADSLD FASIRDMVMG QLEGSAQTVA LYAWTSIRTS
GNVMITVVGN VVMVPLVLFY LLYDWNRMLA RMQTVVPRRW LDKTLQLAHD MDQMLSQYLR
GQLLVMGVLA AYYAIALSLA RFEIALPVGI FTGLAVFIPY IGFATGLALA LLAALLQFGD
WYGFGAVALI YGVGQILESF FLTPRLVGER IGLHPLAVIF ALLAFGQLFG FFGVLLALPV
SAILSVATRE LRQSYLASSL YKN