Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3930 |
Symbol | |
ID | 4001933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 598762 |
End bp | 600561 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637945721 |
Product | voltage-gated chloride channel |
Protein accession | YP_557121 |
Protein GI | 91781915 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000147499 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACAGCCG ACACCCATAA GCGCGACTTC GCCGAAAACC GCCGCCTGCC CGGCATCGCT CTGCTGGCAG CGGGCATCGG CGTAATCAGC ACGCTGGCTG CTTTCGTGCT GCTGAATCTG ATCCACCTGT TCACGAACCT GTTTTTCTTC GGCGGGCTTT CGTTCGCGGA ACGCTCGCCG GCGCAAAACA CGCTCGGCGC CTGGGTCGTG CTGGTGCCGG TGGCGGGTGG TCTGATCGTC GGGCTGATGG CGCGCTTCGG CTCGGAGAAG ATTCGCGGCC ACGGCATTCC GGAAGCGATC GAAGCCATTC TGTTCGGCAA GAGCCGCATG TCGCCGAAGG TAGCGATCCT CAAGCCACTG TCCTCCGGCA TCGTGATCGG CAGCGGTGGG CCGTTCGGCG CGGAAGGTCC CATCATCATG ACGGGCGGCG CGTTGGGTTC GCTGATTGCG CAGTGCGTGC GCGTGAGCGC GGCGGAGCGC AAAACACTGC TGGTCGCCGG CGCCGCGGCC GGCATGACCG CGGTGTTCGG CACACCGGTC GCGGCGGTGC TCCTTGCGGT CGAGCTGCTG TTGTTCGAAT GGCGGCCGCG CAGCTTTCTG CCGGTCGCGC TCGCCTGTGC GGTGGCCGGC TTTGCGCGCG GCGCCCTGTT CGGCGCGGGA CCGTTGTTTC CGCTCGAAAC GGCGCCGCCT GGCGCGCTCT CGCTGTTCAC CTGCGTGATT GCCGGCTTGC TCTCGGGAGC GCTGGCAGCA GGCCTCTCCG CCGCGCTCTA CAAGACCGAA GACCTGTTCG GCAAACTCAG GATCCACTGG ATGTGGTGGC CCGCGCTCGG CGGACTGGTG GTCGGCATTG GCGGCTTTAT CGAGCCGCGT GCGCTGGGCG TCGGCTACGA CGTCATCGGT GACCTGCTGC ATCTGCATCT GGCCTTGGAG ATTGCGCTTG CGTTGCTGCT CGTCAAGGCC GTCATGTGGG TCGTCGCGCT CGGCTCGGGT ACGTCGGGCG GCGTGCTGGC GCCGTTGCTG ATGCTCGGCG CCGGTCTCGG CGTGGTGTTG AGCCATCTGA TGCCGGGCGG CGATCCGGCA CTGTGGCCGC TCGTGTGCAT GGCCGCCACG CTCGGCGCGA CGCTTGGGGC GCCGCTCACC GCAATCGTGT TCGCGTTCGG CCTGACCAAC GACAGCAACG CGTTATTGCC GCTACTCGCC GCCACGCTGG TCGCACATGG CTTCGCGACG GTCGTGATGC GACGCTCGAT CATGACCGAG AAAATCGCGC GCCGCGGGTA TCACATCTAC CGCGAATACG GCGTCGATCC ACTGGAGCGC CATTACGTCG ACGAAGTCAT GACACGCGAC GTCGAAACGA TCGACGCACA CTCGACAGTC GACGAAACGC TGACGCGGTA CTTCGGCCCT GGGCAAACGC ATCGCGCGTA TCCGGTGATC GTGGACGGCG CGGTGACCGG GGTGATCGAC CGCGCGGCCC TCGAACGCAT TCCTCGCACT CGCGACCGCC AGCCCGGCGC GACTACATTG CTCGAACTGA TGGAGACGCG CGCGCCTGTC GTCGCGTTGC CCGGCGAGAC CTGCCGGCTC GTTGCAACAC GCCTCGCGGT TCATGGCCTG GAGCGCATGC CCGTGGTGAG CGACATGAAC ACGCTGCGAA TCGTCGGCAT CGTGGCGCGC AGCGACCTGG TGAAACCGTC GCTCGCGCAT TTCGACGAAG AGCATAAGAA GGAGCGCTTC CGGCGTCTCG GCACGCGTGC GGCGAAGCGT CGCCTTTCGC CGCTTCGCCG CAGCGGCTGA
|
Protein sequence | MTADTHKRDF AENRRLPGIA LLAAGIGVIS TLAAFVLLNL IHLFTNLFFF GGLSFAERSP AQNTLGAWVV LVPVAGGLIV GLMARFGSEK IRGHGIPEAI EAILFGKSRM SPKVAILKPL SSGIVIGSGG PFGAEGPIIM TGGALGSLIA QCVRVSAAER KTLLVAGAAA GMTAVFGTPV AAVLLAVELL LFEWRPRSFL PVALACAVAG FARGALFGAG PLFPLETAPP GALSLFTCVI AGLLSGALAA GLSAALYKTE DLFGKLRIHW MWWPALGGLV VGIGGFIEPR ALGVGYDVIG DLLHLHLALE IALALLLVKA VMWVVALGSG TSGGVLAPLL MLGAGLGVVL SHLMPGGDPA LWPLVCMAAT LGATLGAPLT AIVFAFGLTN DSNALLPLLA ATLVAHGFAT VVMRRSIMTE KIARRGYHIY REYGVDPLER HYVDEVMTRD VETIDAHSTV DETLTRYFGP GQTHRAYPVI VDGAVTGVID RAALERIPRT RDRQPGATTL LELMETRAPV VALPGETCRL VATRLAVHGL ERMPVVSDMN TLRIVGIVAR SDLVKPSLAH FDEEHKKERF RRLGTRAAKR RLSPLRRSG
|
| |