| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3928 |
|---|
| Symbol | |
|---|
| ID | 4001935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 601109 |
|---|
| End bp | 602272 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637945723 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_557123 |
|---|
| Protein GI | 91781917 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000126137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGCCTCGCT CCGCCGTCGC TCGCTGGCTC GCCCGCCTCG CACCGCCGCC CATCGCCCTC
GCGTGGAAGG AGCGTTTGCG TTCGTGCGTC GGTGCATTGG TCGGCATTGC GTTCACCGGG
GCCATCACGC ATCTGCTGCT GGGTTCGAGC GGCAATATCC CGTTGCTGGT CGCGCCTATG
GGCGCGTCGG CCGTGCTGCT GTTCGCGGTG CCGGCGAGTC CGCTTGCGCA ACCGTGGTCC
ATCATCGGCG GCAATCTCGT TTCGGCGACG GTGGGCGTTG CCTGCGCGAG CTGGATCGGC
GATCCGCTAC AGGCGGCGCC GCTCGCCGTG GCGGCCGCGA TCTGCGCCAT GTTCGCGCTG
CGCTGCGTGC ATCCGCCATC CGGAGCGGTG GCGCTCACGG CGGTGTTGGG CGGACCGGCC
GTGCATTCGC TCGGCTACCG TTTCGTGCTC GCGCCGATCG CGCTTCAGTC CGCGGCGCTC
CTCTGCGCCG CCATCGTGTA TCACGCGCTC ACCGGGCACC GCTATCCCCA TTCAGCACGG
CAAACCACGA GCCGGTCAGA CCCAGCCGCC CGGTCGCGGC CCGGCTTCAC GCGCGCGGAT
CTGGACGCCG TGCTCAAAGG GCAAAGCGAA TTGCTCGACA TTGCACCTGA CGACCTCGAA
TCCCTGCTGC GGGCCTTGCA GTTGCAAACC TACGCGCGCA GCTTCGACGA GCTCACCTGC
GCGAGCATCA TGTCGCGTGG CGTAATCACC GTGTCGGCGC ACACGCGGGC GGCAACCGCA
TGGAGCATTC TGCAACGCCA CGGCGTGAAG GCACTTCCGG TCACGAACGA GGAAAGGCAC
GTAGTCGGAA TCGTCACGCG CGCCGACCTC GGCGGTGTGC GCCAACCGGG CGCGCTCACC
AGGCTTCTAC GCCGGTTGCC CGGCCGGCGC CGTGCCAACG AGCCCACCGT CGGCACGCTG
ATGACAACCC ACGTCCACAC GGTCGACACC ACCACGCCCA TCGCGGACCT GGTGCCGCTC
TTCGCTGACT TCGGACACCA TCACATTCCG GTGCTCGACA GCCGCACGAG GCAGCTCGCG
GGAATGGTGA CTCAGGCAAA TCTGATCGCC GGGTTATACC GCCAGCCCAA TACGTCAATG
CAAGCGTCGC AGCGCACGGC CTGA
|
|---|
| Protein sequence | MPRSAVARWL ARLAPPPIAL AWKERLRSCV GALVGIAFTG AITHLLLGSS GNIPLLVAPM
GASAVLLFAV PASPLAQPWS IIGGNLVSAT VGVACASWIG DPLQAAPLAV AAAICAMFAL
RCVHPPSGAV ALTAVLGGPA VHSLGYRFVL APIALQSAAL LCAAIVYHAL TGHRYPHSAR
QTTSRSDPAA RSRPGFTRAD LDAVLKGQSE LLDIAPDDLE SLLRALQLQT YARSFDELTC
ASIMSRGVIT VSAHTRAATA WSILQRHGVK ALPVTNEERH VVGIVTRADL GGVRQPGALT
RLLRRLPGRR RANEPTVGTL MTTHVHTVDT TTPIADLVPL FADFGHHHIP VLDSRTRQLA
GMVTQANLIA GLYRQPNTSM QASQRTA
|
|---|
| |