Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3921 |
Symbol | |
ID | 4001905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 607616 |
End bp | 608125 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637945729 |
Product | OmpA/MotB family outer membrane protein |
Protein accession | YP_557128 |
Protein GI | 91781922 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.315585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00726573 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGTCAA AACTTCGCTT TGCTTTTGCT GTATTGATGG TCGGTGCGCT GGCCGCGTGC CACTCGGGCG TCAAGCTCGA CGAAAACGCT AACAAGGGTG GTTCGGTCTC GGCACAGCCG AACCCGAACG ATGTCGCAAC GGTCAACGTC GACCCGCTGA ACGATCCGAA TAGCCCGCTC GCCAAGCGCA GCATCTACTT CGACTTCGAC AGCTACTCGG TGAAAGACGA CTATCAATCG CTGCTGCAAC AACACGCGCA ATACCTGAAG AGCCATCCGC AACGCCACGT CCTGATCCAG GGCAACACCG ACGAACGCGG CACCAGCGAG TACAACCTGG CACTCGGCCA GAAGCGTGCT GAGGCTGTGC GCCGTTCGCT GTCGCTGATG GGCGTGACGG ACTCGCAAAT GGAAGCCGTG AGCCTCGGCA AGGAAAAGCC GCAAGCTACG GGTCATGACG AATCGTCGTG GGCACAAAAC CGCCGCGCCG ACCTCGTGTA CCAACAGTAA
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Protein sequence | MMSKLRFAFA VLMVGALAAC HSGVKLDENA NKGGSVSAQP NPNDVATVNV DPLNDPNSPL AKRSIYFDFD SYSVKDDYQS LLQQHAQYLK SHPQRHVLIQ GNTDERGTSE YNLALGQKRA EAVRRSLSLM GVTDSQMEAV SLGKEKPQAT GHDESSWAQN RRADLVYQQ
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