| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3920 |
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| Symbol | tolB |
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| ID | 4001906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 608158 |
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| End bp | 609450 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637945730 |
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| Product | translocation protein TolB |
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| Protein accession | YP_557129 |
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| Protein GI | 91781923 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0501302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGA TGACCAAGCT AGGCCTGCGG ACACTTGTAG CGTCGTGCCT GATCGCCGTC
GGCGGTGCCG CCAACGCACA ACTCAACGTC CTCGTGACGG GCGTCGGGTC CACCCAGTTT
CCGATCGCAA CGGCGAATTT TGCCAATGAA GCGAACTCGC CGCAGCAGGT CAGCACGATC
GTGCGTCAGG ATCTGCAACG CAGCGGCAAA TTCACGAACA TCGACGCGGG CGCCACGCCG
GTGTCCGAAA CGGATTCCGT CGACCTCGGC AGCTGGAAGG CCAAGGGCGC CAACGCATTC
GTGTCGGGCA GCGTGAACCG CCTGCCGAAC GGCCAGTATG AAGTGCGCTT CAAGCTGTAC
GACACCGTCA AGGGCGAGAG CCTCGGCGGC CTCGTGCTGG TGAGCCCGGA AAGCGGCTTG
CGCATGAGCG CGCACAAGGT CGCGGACTAT ATCTACGCGA AGCTGATGGG TGGCCGCGGC
GTGTTCGCCA CGCGCCTGTC GTACGTCATC AAGACGGGCG GCCGTTATCA GTTGCAGATC
TCCGATTCGG ACGGCCAGGA CGCGCACATC GCGCTGTCGA GCCCCGAGCC GATCATCTCG
CCGGCATGGT CGCCTGACGG CACCAAGGTC GCTTACGTTT CGTTCGAAAA GAAGAAGCCG
ATCGTTTATA TCCACGATCT GCCCACGGGG CGCCGCATCG TGGTGTCGGA CCAGAAAGGC
AACAACAGCG CGCCGGCCTG GTCGCCGGAC GGACGCACGC TGGCGGTCGC ACTCTCGCGC
ACCGGCAACA CACAGATTTT CGCCGTCAAT GCAGACGGCA GCGGCCTGCG GCGTCTCACG
CAAGGCAGCT CGATCGACAC CGAACCGTGT TTCTCGCCTG ACGGCCAGTC GATCTATTTC
ACCAGCGACC GTGGCGGCCA GCCGCAAATC TACAAGATGT CGGCCCAGGG CGAAAACGCC
GGCGCCGCAC AGCGCGTCAC GTTCACGGGC AGCTACAACA CCAGCCCGCG CGTGAGCCCG
GACGGCAAGC AGCTCGCTTA TATCTCGCGC GTCGGCGGCG GGTTCAAGCT TTATATCCAG
GACCTGCAGG GTAACACCGC CACAGGCCTG ACGGACACGA CACATGACGA ATCGCCGAGC
TTCGCGGCGA ACGGTCAGTA CATTCTTTAC GCCACACAGG TGAACGGCCG TGGCGTGTTG
GCCGCAGTAT CGACCGACGG TCGCACTCGG CAGGTCCTGT CCGTTCAGGG TGGCAGCGTA
CGCGAGCCGT CCTGGGGCCC GTTTATGCAA TAA
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| Protein sequence | MSLMTKLGLR TLVASCLIAV GGAANAQLNV LVTGVGSTQF PIATANFANE ANSPQQVSTI
VRQDLQRSGK FTNIDAGATP VSETDSVDLG SWKAKGANAF VSGSVNRLPN GQYEVRFKLY
DTVKGESLGG LVLVSPESGL RMSAHKVADY IYAKLMGGRG VFATRLSYVI KTGGRYQLQI
SDSDGQDAHI ALSSPEPIIS PAWSPDGTKV AYVSFEKKKP IVYIHDLPTG RRIVVSDQKG
NNSAPAWSPD GRTLAVALSR TGNTQIFAVN ADGSGLRRLT QGSSIDTEPC FSPDGQSIYF
TSDRGGQPQI YKMSAQGENA GAAQRVTFTG SYNTSPRVSP DGKQLAYISR VGGGFKLYIQ
DLQGNTATGL TDTTHDESPS FAANGQYILY ATQVNGRGVL AAVSTDGRTR QVLSVQGGSV
REPSWGPFMQ
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