Gene Bxe_A3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3919 
Symbol 
ID4001907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp609589 
End bp610632 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content66% 
IMG OID637945731 
ProductTonB protein 
Protein accessionYP_557130 
Protein GI91781924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0920445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA AGAATTCCGA ATACCCGCTC CAGCCACCGC GTGAACGCGG CACCGGGCGA 
GCCTTTGTGT TCGCTCTCGT GATGCACGCG CTGCTCGGGT TCTTCCTGTA TCACGGCATT
CAGTGGCAAA ACAGTACGCC CGAAGGCGCG GAAGCGGAGC TGTGGACCGA AGTGCCGGAT
ACGTCGATCC CGCGCCCGGT TCCGCCGCCG GTACCGGTGC CGGTGGCTCC TGCTCCGCCG
ATGCGGGACG AACAGGCCGA CATCGCGCTG CAGGAAAAGA AGCGTCAGCA ACAGGAAGCG
GCTCGCGAGG CTCAGTTGGC CGAACAGCAG CGTCAGCAGA AACTGCAGGC CCAGCAGGAA
GCCGAGGCGA AGCGTCAGCA GCAACTGGCC GCGGACCAGG CCGCGCAGAA GGCCGCGGCG
GCCAGACAGA AACAGCTACA GCTACAGCAG CAGCAACAGC AACAGCAACA GCAGCAGGAG
GCCAGCAAGC TGAAGCAACA GCAATTGGCC GAGCAGCAAA AGCAGCAGCA GTTGAAAGAA
CAGCAGCAGG AACAGCAACA GAAGCAGGCC GAGGCTGAGG CGCAGAAGAA GGCCGACGCG
CAGAAAGCCG CGAAGGCCAA GGCGCAGGCG GACGCCGCGG CGCAAGCGAA GAAACTGGAT
GCGGAGCGCC GCGCGCGGCT CGCGCAGATG CAGGGTCTCG CCGCCACCGG CACCGGCTCG
ACCACGAGCG ATGGGCTCGG AAAGAGCGGC ACGGGCAGCG GCTCGGGTGG CACGGCGACG
TCGCCGGGTT ACTCCGACAA GGTGCGTCGT GCGGTGCGCC CGAATATCAC CTGGGGCGGT
GAAACGAGCG GCCTGGAGAC AGTGGTCTCC GTGCGTTGCT CGCCGACCGG CACCTTGCTT
GGCGCAACGA TTTCGCGCAG CAGCGGCAAC CCGGCGTGGG ACGACGCGGC GCTGCGGGCC
GTCCAGCGTA CCGATCCGAT GCCTCAGGAC ATCAATGGCA AGACCCCGAC CAGCTTCCTG
ATTACGTTGC GCCCGGCCGG TTGA
 
Protein sequence
MIRKNSEYPL QPPRERGTGR AFVFALVMHA LLGFFLYHGI QWQNSTPEGA EAELWTEVPD 
TSIPRPVPPP VPVPVAPAPP MRDEQADIAL QEKKRQQQEA AREAQLAEQQ RQQKLQAQQE
AEAKRQQQLA ADQAAQKAAA ARQKQLQLQQ QQQQQQQQQE ASKLKQQQLA EQQKQQQLKE
QQQEQQQKQA EAEAQKKADA QKAAKAKAQA DAAAQAKKLD AERRARLAQM QGLAATGTGS
TTSDGLGKSG TGSGSGGTAT SPGYSDKVRR AVRPNITWGG ETSGLETVVS VRCSPTGTLL
GATISRSSGN PAWDDAALRA VQRTDPMPQD INGKTPTSFL ITLRPAG