Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3915 |
Symbol | |
ID | 4001911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 612457 |
End bp | 613203 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637945735 |
Product | putative short-chain dehydrogenase/reductase SDR |
Protein accession | YP_557134 |
Protein GI | 91781928 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.29888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0896324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTGT TCGTCACCGG CGCGTCCGCG GGATTCGGCG CCGCTATCGC GCGCGCCTTC GTCAAGGGCG GCCATCGTGT CGTCGCCGCG GCACGCCGCA AAGACCGTCT GCAGGCGCTC GCCGACGAAC TCGGCGACGC GCTTCTGCCG TACGAACTCG ACGTGCGCGA CCGCGCCGCC GTCGAAGCCG TGCCGGCCGC GCTGCCCGCG GACTTTGCCG CCATCGACGT GCTGGTCAAC AATGCCGGCC TCGCACCGGA CATGGAGCCG GCGCAAAAAG CGAGTCTCGA CGCATGGACC GCCATGATCG AGACCAACTG CACAGGTCTC GTACAGGTCA CGCACACCCT GCTGCCCGGC ATGGTGGAAC GCAATCGCGG CCACATTTTC AATCTGGGCT CGTCAGCGGC CAACTGGCCG TACGCGGGCG GCAACGTCTA CGGAGCCACC AAGGCGTTCG TGCGTCAGTT CAGCCTGAAT CTGCGCGCCG ATCTGGCAGG AAGCGCGCTT CGGGTGACCG ACATCGAGCC GGGCCTGTGC GGCGGCACCG AGTTCTCGAA CGTGCGTTTT TGCGGCAAAG ACGCCAGCGC CGCCAGAATG GTCGAAAACG TGCAACCGCT CACACCCGAA GACATCGCGG ACTCGATCTA CTGGATCGCC ACCCGCCCGG CGCACGTCAA TATCAACACG ATCGAGCTGA TGCCGGTGGC TCAATCGTTC GCCGGTTTGA CCGTTTATCG CGGCTGA
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Protein sequence | MIVFVTGASA GFGAAIARAF VKGGHRVVAA ARRKDRLQAL ADELGDALLP YELDVRDRAA VEAVPAALPA DFAAIDVLVN NAGLAPDMEP AQKASLDAWT AMIETNCTGL VQVTHTLLPG MVERNRGHIF NLGSSAANWP YAGGNVYGAT KAFVRQFSLN LRADLAGSAL RVTDIEPGLC GGTEFSNVRF CGKDASAARM VENVQPLTPE DIADSIYWIA TRPAHVNINT IELMPVAQSF AGLTVYRG
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