| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3914 |
|---|
| Symbol | glyA |
|---|
| ID | 4001912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 613720 |
|---|
| End bp | 614967 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637945736 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_557135 |
|---|
| Protein GI | 91781929 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.355744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.102127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACA GAGCCCAAAG CACCATCGCC AACGTCGATC CTGAACTCTG GAAGGTCATC
GAGCAGGAAA ACCGCCGTCA GGAAGAGCAC ATCGAACTGA TCGCGTCGGA AAACTACACG
AGCCCGGCTG TCATGGCTGC GCAAGGCTCG CAACTCACGA ACAAGTACGC CGAAGGGTAT
CCGGGCAAGC GCTATTACGG CGGTTGCGAG TACGTGGACA TCGCCGAGCA GCTGGCGATC
GACCGTGTGA AGCAACTGTT CGGCGCCGAA GCCGCCAACG TGCAGCCGAA CTCCGGCTCG
CAGGCCAACC AGGGCGTGTT CTTCGCCGTG CTCAAGCCGG GCGATACGAT CATGGGCATG
AGCCTCGCGC ACGGAGGCCA CCTGACTCAC GGTTCGCCGG TCAACATGTC GGGCAAGTGG
TTCAACGTGG TGAGCTACGG CCTGAACGAA GCCGAAGACA TCGACTACGA AGCCGCGGAG
AAGCTCGCTC AGGAACACAA GCCGAAGCTG ATCGTGGCGG GCGCCTCCGC GTTCTCGCTG
CGTATCGATT TCGAACGCAT GTCGAAGATC GCCAGGTCGG TCGGCGCGTA TTTCATGGTC
GACATGGCGC ATTACGCCGG TCTGATCGCC GCGGGCGTCT ATCCGAATCC GGTGCCGCAC
GCCGATTTCG TCACCACCAC CACGCACAAG AGCCTGCGCG GCCCGCGCGG CGGCGTGATC
CTGATGAAGG CGGAGTTCGA AAAGCAGATC AACTCGGCCA TCTTCCCGGG CATTCAAGGT
GGACCGTTGA TGCACGTGAT CGCCGGCAAG GCCGTCGCGT TCAAGGAAGC GCTCTCGCCG
GAGTTCAAGG CGTATCAGCA GCAGGTCGTC GAAAACGCGC GTGTGCTGGC GGAAACGCTG
GTCAAGCGCG GTCTGCGCAT CGTGTCGGGC CGCACTGAAA GCCATGTGAT GCTCGTCGAC
CTGCGTGCAA AGAAGATTAC CGGCAAGGCT GCGGAAGCAG CGCTGGGCAC GGCTCACATC
ACGGTCAACA AGAACGCGAT TCCGAACGAT CCGGAAAAGC CGTTCGTGAC GAGCGGCGTG
CGTCTCGGCT CGCCGGCCAT GACCACGCGC GGCTTCGGCG TCAAGGAAGC CGAGCAGGTG
GGTAACCTGA TCGCCGACGT GCTGGACAAC CCGGAAGACG CCGCCACGAT CGAACGTGTG
CGCGCGCAGG TCGCCGAGCT GACCCAGCGC TTCCCGGTTT ACCGTTAA
|
|---|
| Protein sequence | MFDRAQSTIA NVDPELWKVI EQENRRQEEH IELIASENYT SPAVMAAQGS QLTNKYAEGY
PGKRYYGGCE YVDIAEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAV LKPGDTIMGM
SLAHGGHLTH GSPVNMSGKW FNVVSYGLNE AEDIDYEAAE KLAQEHKPKL IVAGASAFSL
RIDFERMSKI ARSVGAYFMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEFEKQI NSAIFPGIQG GPLMHVIAGK AVAFKEALSP EFKAYQQQVV ENARVLAETL
VKRGLRIVSG RTESHVMLVD LRAKKITGKA AEAALGTAHI TVNKNAIPND PEKPFVTSGV
RLGSPAMTTR GFGVKEAEQV GNLIADVLDN PEDAATIERV RAQVAELTQR FPVYR
|
|---|
| |