| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3913 |
|---|
| Symbol | nrdR |
|---|
| ID | 4001913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 614974 |
|---|
| End bp | 615456 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945737 |
|---|
| Product | transcriptional regulator NrdR |
|---|
| Protein accession | YP_557136 |
|---|
| Protein GI | 91781930 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.275077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0858388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTGCC CCTTCTGCCG TCACGCCGAT ACGCAGGTTG TCGACTCGCG CGTATCCGAA
GACGGCGCAA CGATTCGCCG GCGCCGCCGC TGCCCGGCCT GCGACAAACG TTTCACGACG
TATGAGCGGG TCGAGCTGGC GTTGCCGTCG GTCGTCAAGA AGGATGGCAG CCGCACGGAA
TTCGACCGCC GCAAGATCGT CGCGAGCATG CAACTGGCGC TGCGCAAGCG CCCGGTGGCG
GCAGACGCGA TCGAAGCGGC GGTTGCCCGC ATCGAGTATC AGTTGCTCGG TAGCGGCGAG
CGCGAAGTGC GCAGTGAGCG CCTCGGCGAA CTCGTGATGA ACGAGTTGCG TGCGCTCGAC
ACCATTGCCT ACGTTCGTTT CGCTTCCGTT TACCGGCGCT TCGAAGACGT CTCCGAATTC
GAAGACGTGA TCGAAGAATT TCGCCGCGCC TCTTCTCCTC CCAAGCCTTC CCGCAAACGC
TGA
|
|---|
| Protein sequence | MHCPFCRHAD TQVVDSRVSE DGATIRRRRR CPACDKRFTT YERVELALPS VVKKDGSRTE
FDRRKIVASM QLALRKRPVA ADAIEAAVAR IEYQLLGSGE REVRSERLGE LVMNELRALD
TIAYVRFASV YRRFEDVSEF EDVIEEFRRA SSPPKPSRKR
|
|---|
| |