| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3898 |
|---|
| Symbol | |
|---|
| ID | 4002565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 628685 |
|---|
| End bp | 629845 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637945752 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_557151 |
|---|
| Protein GI | 91781945 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.506514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA TCCTCACCCG CGATTTCCTC GCGTTGATCC TCAGTGTCGC CGTGGTCGGA
CTCGGCAGCG GCGCGACACT TCCTCTTACC GCCCTCTCGC TCACACAAGC CGGCTATGGC
ACCGACGTGG TCGGCCTGCT GACCGCCGCG CAAGCAGGCG GCGGCCTCGC CATCGTGCCG
CTCGCCGGCT GGATCGCGGC GCGCTTTGGC GGCCGCCGGG TGATCGTCGG CGCGGTGCTG
GTGGTGGCGT TCGCCACCGC GCTGATGCAA CTCACTTCGA ACCTCTGGCT CTGGGCCGTG
TTGCGCGTGC TGTGCGGCGC GGCGCTGATG CTGCTCTTCA CGATCGGCGA AGCCTGGGTC
AACCAGTTGG CCGACGACGC TTCGCGCGGC CGCGTGATCG CCATCTACGC GACGAACTTC
ACGCTGTTCC AGATGGCCGG GCCCGTGCTG GTGAGTCAGA TCGCCGGCTT CACGCATTGG
CGTTTCCTGA TGTGCGGCGC GATCTTCCTG CTGGCGCTGC CGATGCTCGC CACGATCCGC
GCGACGCCGC AAGCGTCCGG CGACGAGCAC GCGGCGCACG GCGGCTGGCG TCATGTTTTG
CCGCAGATGC CGGCGCTCGT GATCGGCACC GGGTTCTTCG CGTTGTTCGA CACGATCGCG
CTCTCGTTGC TGCCGCTCTT CGCGATGTCG CACGGCATTG CGAGCGAGGT GGCCGTGCTG
TTCGCGTCGG CTCTGCTGCT CGGCGATACG ACGATGCAGT TTCCGATCGG CTGGCTCGCT
GATCGGCTGG GGCGCGAGCG CGTGCATATC GGTTGCGGCG TGCTCGTCGT GGCGTTGCTG
CCAGTGCTGC CGTGGGCGGT CACCTCGCCG TGGCTTTGCT GGCCGCTGCT CTATGTGCTC
GGCGCGGCGG CGGGCGCGAT CTACACGCTG TCGCTGGTGG CCTGCGGGGA GCGCTTTCGC
GGTGTCGCGC TGGTGTCGGC CAGTTCGCTG GTGGGCGCGT CGTGGAGCGC GGCCAGTTTC
GGCGGCCCGC TGGTGGCCGG TGCGCTGATG AAGGGCGTGG GCAACGATGC GGTGGTCGGT
GTGCTGCTCG TGGCGGCGGT GGCGTTTCTT GCTGCGGTTT GGTGGGAAAA GCGACGGGCG
CCGGTGCGGG TTGGGGGTTG A
|
|---|
| Protein sequence | MKVILTRDFL ALILSVAVVG LGSGATLPLT ALSLTQAGYG TDVVGLLTAA QAGGGLAIVP
LAGWIAARFG GRRVIVGAVL VVAFATALMQ LTSNLWLWAV LRVLCGAALM LLFTIGEAWV
NQLADDASRG RVIAIYATNF TLFQMAGPVL VSQIAGFTHW RFLMCGAIFL LALPMLATIR
ATPQASGDEH AAHGGWRHVL PQMPALVIGT GFFALFDTIA LSLLPLFAMS HGIASEVAVL
FASALLLGDT TMQFPIGWLA DRLGRERVHI GCGVLVVALL PVLPWAVTSP WLCWPLLYVL
GAAAGAIYTL SLVACGERFR GVALVSASSL VGASWSAASF GGPLVAGALM KGVGNDAVVG
VLLVAAVAFL AAVWWEKRRA PVRVGG
|
|---|
| |