Gene Bxe_A3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3897 
Symbol 
ID4002566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp629910 
End bp631076 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID637945753 
Productmajor facilitator transporter 
Protein accessionYP_557152 
Protein GI91781946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.808229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGC CCCTGCTCGC CCTTGCCGTT GCCGCTTTTG GAATCGGTAC CACCGAATTC 
GTGATCATGG GACTGCTGCC CGACGTGGCG CGCGACCTGG CCGTTTCGAT TCCCGCGGCC
GGCATGCTGG TGTCGGCGTA TGCGCTCGGC GTCACGATCG GCGCGCCGAT CGTCGCGATC
GCGGTCGCCA ACATGCCGCG CAAGAAGGCG CTGATGAGTC TGATCGGCGT GTTTATCGTC
GGCAATCTGC TGTGCGCGGT GGCGCCGGGT TATGCGGTGC TGATGGCCGC GCGCATCGTG
ACGGCGTTCT GCCACGGCGC GTTCTTCGGT ATCGGTTCGG TGGTGGCTGC GGGCCTCGTC
GCGCCGAACC GCCGCGCGCA AGCCATCGCG TTGATGTTCA CGGGCCTCAC GCTCGCCAAC
GTGCTGGGCG TGCCGCTCGG CACCGCGCTC GGCCAGGCGG TGGGCTGGCG CGCCACTTTC
TGGGCGGTAA CGGGCATCGG TCTCGTCGCG GCGGCCGCGC TCGCCGTGTG CCTGCCGGCG
AAGATCGAGA TGCAGAAGGC GAGCCTCGTC CACGAATTCA GCGTGCTGAA GAACCCGCAA
GTGCTGATGG TGCTCGGCAT CAGCGTGCTC GCGTCGGCAA GTCTCTTTTC CACCTTCACG
TACATCACGC CGATTCTCGA AGACGTGAGC GGATTCACGC CGCATGCGGT CACCCTCGTG
CTGCTGCTGT TCGGGCTCGG CCTGACGGTG GGCAGCACGC TCGGCGGCAA GCTCGCCGAC
TGGCGGCTGA TGCCTTCGCT GGTGGCGTTT CTGCTGGCCA TCGTGGTGAT TCTGACCATC
TTCGCCGGCA CCATGCACTC GGAGATCCCG GCGATGATCA CGATTTTCGC GTGGGGCGTT
CTGGCCTTCG CCATCGTGCC GCCGCTGCAA ATGCTGATCG TCGACCGCGC GAGCCATGCG
CCGAATCTGG CTTCGACCTT GAACCAGGGC GCCTTCAATC TCGGCAACGC GACGGGCGCG
TGGCTGGGCG GCATGGCGAT CGGCGCGGGC GCACCGCTCA CCACGCTGCC GTGGGTCGGC
GTGGCGACCG CGATCGGCGC GCTGGCGCTG ACGCTGTGGT CGGTGTCGAT CGAGCGGCGC
GCGCAGCGGG TCGCCGTGGC GGGCTAG
 
Protein sequence
MPLPLLALAV AAFGIGTTEF VIMGLLPDVA RDLAVSIPAA GMLVSAYALG VTIGAPIVAI 
AVANMPRKKA LMSLIGVFIV GNLLCAVAPG YAVLMAARIV TAFCHGAFFG IGSVVAAGLV
APNRRAQAIA LMFTGLTLAN VLGVPLGTAL GQAVGWRATF WAVTGIGLVA AAALAVCLPA
KIEMQKASLV HEFSVLKNPQ VLMVLGISVL ASASLFSTFT YITPILEDVS GFTPHAVTLV
LLLFGLGLTV GSTLGGKLAD WRLMPSLVAF LLAIVVILTI FAGTMHSEIP AMITIFAWGV
LAFAIVPPLQ MLIVDRASHA PNLASTLNQG AFNLGNATGA WLGGMAIGAG APLTTLPWVG
VATAIGALAL TLWSVSIERR AQRVAVAG