| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3892 |
|---|
| Symbol | |
|---|
| ID | 4002571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 636067 |
|---|
| End bp | 637749 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637945758 |
|---|
| Product | aspartate/alanine exchanger family protein |
|---|
| Protein accession | YP_557157 |
|---|
| Protein GI | 91781951 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGC TACATCATAT CTTTCAGAAA TCACCCGAGA TTGCGCTGTT TCTGTCGCTC
GCGGCCGGCT ACTTCATCGG CCAGATCAAC TTCGGCAAAT TCCAGCTGGG CGGTGTGGGC
GGGTCGTTGC TGGCCGCGGT CGTGATCAGT CAGGCGGGCG TGACGATCGA CAACGGTGTG
AAGTCGGTCA TGTTCGCCGT CTTCATCTAC GCGGTCGGCT ACGACTCCGG TCCGGGCTTC
TTCAACTCAC TGAACCGCAA GACGCTGCGT GAGATCGCGA TGGCCGTCTT TCTGGCCGTC
ACCGCGCTGA TCACCGTGGT CGTATGCGCG AAGCTGTTCC ACCTGAACAA GGGGCTTGCC
GCCGGACTCG CGGGCGGCGC GCTCACGCAG TCGGCGATCA TCGGCACGGC GGGCGACGCG
ATCGCGCGTC TCGGCCTGCC CGCCGATCAG GTCAAGTCGC TGCAATCGGA CGTGGCGATT
GCCTACGCGG TGACTTACGT ATTCGGCTCG TTGGGCGCGA TCATCGTGTG CGTGAATATT
CTGCCCAAGT TCATGGGGCA GGGTTTGCGC GAAGCCTCGG TCGAAGTGGA GCGCGAACTG
ACGGCGGGCG CGGCGGCCGC TGGCCCGGGG CAACTCTCCG CGTTGCCCGA GATGGTGGGC
CGCGCGTACA AGATCGATGT CAGCGCCGGA AAAACGGTGA AGGCTGTGGA GACGCTGCAT
CAAGACCTGT TGACGATCGA GCGGATCAAG CGGGACGGCC AGCCGCTCGA CCCGGCGCCC
GGTCTGATCC TGAAACCCGG CGACGTGGTC CTCGTGGTCG GCCGCCGCGA GGCAGTGGTC
GAATTCGGCG CGGCCGGAGG CGAGGTTGCC ACCGTGGAGG ACGTCGGCGC CGTCATGCAG
ACCCGCGAAG CCGTGTTCAC GCGCAAGGGC ATGAACCACA CCACGATCGC CGCCGCGCGG
GCCGTGGTGG ATCGCGATAT GCGGCACGGC GTCTATATCC AGAGTATCTC GCGCGCAGGC
CAGCCGCTGC CGGTCCTGCC GGAAACCAAA CTGGAGCACG GCGACGTCAT CACCTTTTAC
GGCTCGCCGA AAGACACCAA GCGAGCCGCC GAGGCAGCCG GCTACGAACT GCCGTACAGC
AACAAGACCG ACTTCATTTA CATGGGCGTC GGCATTGTGC TCGGCTTGTT GATCGGGCTG
ATCGTCGTCA ACGTGGCCGG CATTCCGCTC ACCCTTGGTT CGGGTGGCGG CTGCCTGCTG
GCCGGGTTGC TGTTCGGCTG GATGCGCGGC AAGCATCCAA TGTACGGCGC GATGCCGTCC
GCGGCCTCGC AGTTGCTGAA GGACTTCGGC CTTGCGGCCT TCGTCGCGGT GGTCGGTTTG
AACTCCGGCT TGCAGGCCGT GGTCACCGTC AAACAGAGCG GCATGACGAT CTTCCTGCTC
GGTGTGTTCG TCACGCTGTT TCCGCTATTG CTCACCATGC TGTTCGGCCG CTACGTGCTG
AAGTACAACA ACTCGGCCAT TCTGGCCGGC GCGCTGTCCG GCTCGCGCAG TGCGAATCCG
GCATTCGGCG GCGTGCTCGA CAAGGCCGAA AGCGCTGTGC CGACCGTGCC GTTCGCGATC
ACGTATGCCA TCGCGAACGT TGCGTTGACG CTGCTCGGTC CGCTCGTGGT CGGGCTGGTC
TAG
|
|---|
| Protein sequence | MDWLHHIFQK SPEIALFLSL AAGYFIGQIN FGKFQLGGVG GSLLAAVVIS QAGVTIDNGV
KSVMFAVFIY AVGYDSGPGF FNSLNRKTLR EIAMAVFLAV TALITVVVCA KLFHLNKGLA
AGLAGGALTQ SAIIGTAGDA IARLGLPADQ VKSLQSDVAI AYAVTYVFGS LGAIIVCVNI
LPKFMGQGLR EASVEVEREL TAGAAAAGPG QLSALPEMVG RAYKIDVSAG KTVKAVETLH
QDLLTIERIK RDGQPLDPAP GLILKPGDVV LVVGRREAVV EFGAAGGEVA TVEDVGAVMQ
TREAVFTRKG MNHTTIAAAR AVVDRDMRHG VYIQSISRAG QPLPVLPETK LEHGDVITFY
GSPKDTKRAA EAAGYELPYS NKTDFIYMGV GIVLGLLIGL IVVNVAGIPL TLGSGGGCLL
AGLLFGWMRG KHPMYGAMPS AASQLLKDFG LAAFVAVVGL NSGLQAVVTV KQSGMTIFLL
GVFVTLFPLL LTMLFGRYVL KYNNSAILAG ALSGSRSANP AFGGVLDKAE SAVPTVPFAI
TYAIANVALT LLGPLVVGLV
|
|---|
| |