| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3826 |
|---|
| Symbol | |
|---|
| ID | 4002521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 720325 |
|---|
| End bp | 721710 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945825 |
|---|
| Product | glutamate decarboxylase |
|---|
| Protein accession | YP_557224 |
|---|
| Protein GI | 91782018 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTC TCAAATCACC ACCGCCCACG CCCGAGGACG TCGCCGATGA ATACGCCGCC
ACGATCTCGG GTTCATCGCT GCCCAAGTAC CGGATTCCGG AGGCGTCGTC CGATCGCCGC
GCGGTATTCG ATCTGGTGCG CGACGAACTG TTCATGGACG GCAATTCACG GCAGAACGTC
GCGACGTTCT GCACCACGTA TGCCGACGAC GAAGTGCGCC ACCTGATGGA TCTGTCGATC
GACAAGAACA TGATCGACAA GGACGAGTAT CCGCAAACGG CGGAGATCGA AATGCGCTGC
GTGCACATGC TCGCGGATCT GTGGCATGCC AGCAAGGCAT GGAAGACCAC CGGATGTTCG
ACCACGGGTT CGAGCGAGGC TTGCATGCTC GGCGGTCTCG CGCTCAAGTG GCAATGGAAG
AAGCGCCGGG AAGCACAGGG CAAGCCGACC GACAAGCCGA ACTTCGTGTG CGGACCGGTG
CAGGTGTGCT GGGCCAAATT CGCCCGCTAC TTCGACGTCG AGATGCGCCA GGTGCCCTTG
CGCGGCGAGG CAACCGGGCT GACGCCGGAA GATCTGGCCG AGTATTGCGA CGAGAACACG
ATCGGCGTGG TGGCCACACT CGGCATTACC TTCACCTGCG TCTATGAACC GGTGAAGGCG
CTGGCAGGCG CACTCGACGC GTTGCAAGCC AATGTCGGAC TCGATATTCC GATTCACGTC
GACGCTGCCA GCGGCGGCTT CGTCGCGCCG TTCATCCAGC CGGACCTCGA GTGGGACTTC
AGCGTGCCGC GCGTGAAATC CATCAACGCG TCGGGCCACA AATACGGACT CGCGCCGCTC
GGGGTCGGCT GGGTAGTCTG GCGCAGCACT CAGGATCTGC CCGACGAACT GATTTTCCGG
GTCGATTATC TGGGCGGCGA CATGCCCACG TTCGCACTGA ATTTCTCCCG TCCGGCCGGA
CAGATCATCG CGCAGTACTA CATGCTGCTG CGCCTGGGCC GCGAAGGCTA CCGGCGGATC
CAGCAGGAAT GCGCCGACAC CGCGCAGGCG CTGGCCGACG GGCTGGCGAA GATCGACCAG
CTGGAAATGA TCTACGACGG GCGCGGCGCG CTGCCGGCTG TCTGCTACAA GCTGAAGCAT
CCGGAAACAG CGGGCTTCAC GCTATTCGAC CTGTCCGATC AGGTCCGCAT GCGCGGCTGG
CAGATCGCCT CGTACGAACT GCCGGCAGGG CGGGAAGACA CCATCGTGCA ACGCGTGTTG
ATCCGGCGTG GTGTGACGCG CGACATGGCG GCGATGCTGC TTGAAGACAT CAGGCACGCC
ATCGGGCATC TGACGAAGAA TCCGGTGCTG CATTCGAGCG CCGGTCCGAC CTTCCACCAC
AATTGA
|
|---|
| Protein sequence | MTFLKSPPPT PEDVADEYAA TISGSSLPKY RIPEASSDRR AVFDLVRDEL FMDGNSRQNV
ATFCTTYADD EVRHLMDLSI DKNMIDKDEY PQTAEIEMRC VHMLADLWHA SKAWKTTGCS
TTGSSEACML GGLALKWQWK KRREAQGKPT DKPNFVCGPV QVCWAKFARY FDVEMRQVPL
RGEATGLTPE DLAEYCDENT IGVVATLGIT FTCVYEPVKA LAGALDALQA NVGLDIPIHV
DAASGGFVAP FIQPDLEWDF SVPRVKSINA SGHKYGLAPL GVGWVVWRST QDLPDELIFR
VDYLGGDMPT FALNFSRPAG QIIAQYYMLL RLGREGYRRI QQECADTAQA LADGLAKIDQ
LEMIYDGRGA LPAVCYKLKH PETAGFTLFD LSDQVRMRGW QIASYELPAG REDTIVQRVL
IRRGVTRDMA AMLLEDIRHA IGHLTKNPVL HSSAGPTFHH N
|
|---|
| |