| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3780 |
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| Symbol | |
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| ID | 4002625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 772344 |
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| End bp | 774221 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637945871 |
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| Product | putative epimerase/dehydratase polysaccharide- related biosynthesis protein |
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| Protein accession | YP_557270 |
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| Protein GI | 91782064 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00473075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.357479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGAA GCAAGGCCGC TTGGCTGTCT TTCAGCGCTT TCCTTTTCGA CTTATGCGCG
GTCGCGGCCG CTTGGCTGAT CGCGTACATC ATTCGTTTCA ACGGCTTGGT TCCCGAAGAT
TTTCGGCTCG GGGCGATGCA CTCGCTCGTC TGGGTCCTGC CGACGTACGG CATCATGTTC
CGCATCTTCG GCTTGTACCG CGGCATGTGG GTGTTTGCGA GCTTGCCGGA TCTCGTACGT
ATATCGAAAG CAGTTATCGC CGGGGCGCTC GTCGCCATGG TCGTTTCGGT GCTGGTCCAA
CCTATGCCGA TCGTGCCGCG CTCGGTGCTG GTGGTGTCGC CGCTATTCCT GTTTCTCGCG
ATGGGCGGAT CGCGCGCGCT GTACCGTGCG ACCAAAGAGT TCTACCTGTA TGGCGGCCTC
GTTGCGCAGG GTAAGCCGGT CGTTGTGCTT GGCGCCGGCA ACGCGGGCGC GAGTCTCGCC
CGCGAGCTGT CGCGTTCGAG CGAATGGCGT CTGGTGGGCT TGCTCGACGA CGATGTCTCC
AAGCATGGGC GCGAAATTTA CGGCTACAAG GTATTTGGCT CGATAAGCGA ATTACCGCAA
TTGGCTGAGA CGCTGAAAAC TGAATACGCG ATCATTGCCA TTCCGTCCGC TACAGTGGAT
GTACAGCGGC GTGTAGCGAC GCTATGTGTG CGCGCCGGCG TACGGGCACT CGTGCTGCCT
GCGCTAACCG ACGTCACGCA AGGCCAGGCG TTTCTGTCGC GCGTGCGACA GATTGACCTC
GAAGATTTGC TGGGCCGTGA TCCTATCAAT ATCGATACGC CCCATGTAGA AGCCCTGTTG
CATGACAGAG TGGTGATGGT CACCGGCGCA GGCGGGTCTA TAGGCTCCGA ATTGTGCCGC
CAAATCTTGC GATTCCAGCC GGCTCAACTG ATTGCTTATG ACTTGTCCGA ATTCGCGATC
TATCGGCTTA CTGAAGAGTT GAGCGAGCGT TTTCCAGGCG TGTCAGTAAT TCCGGTTATC
GGAGATGCGA AGGATTCGCT GCTGCTCGAT GAGGTGATGT CGCGTCATAC GCCGCACATC
GTATTTCATG CGGCCGCGTA TAAACACGTC CCGCTAATGG AAGAGCAGAA CGCATGGCAG
GCCGTGCGTA ACAACGTGCT CGGCACGTAC CGGGTAGGTC GCGCTGCGAT TCGTCACGAT
GTAAAGCATT TCGTGCTGAT CTCCACCGAC AAAGCAGTCA ATCCGACCAA CGTTATGGGT
GCGAGTAAAC GTCTTGCGGA AATGGCGTGT CAGGCCTTGC AGCAGACCAG CCCGCGCACC
CAGTTCGAGA CAGTTCGGTT CGGGAACGTA CTCGGGAGCG CCGGGAGTGT CATACCGAAG
TTCCAGCAGC AGATTGCAAA GGGCGGTCCC GTCACGGTGA CGCACCCGGA GATCACGCGC
TTCTTCATGA CCATCCCGGA AGCGTCGCAA CTGGTGCTAC AAGCGTCCAG CATGGGGCAC
GGCGGCGAGA TTTTCATCCT CGACATGGGC GAACCGGTAA AGATCGTCGA CCTGGCTCGC
GATTTGATTC GTTTGTACGG ATTTAACGAG GAGCAGATCC GGATCGTGTT TACTGGTCTA
CGGCCTGGTG AAAAGCTCTA CGAAGAACTG CTGGCTTGCG ACGAGACGAC AACACGTACA
CCTCATCCTA AGTTGCGGAC TGCGCGTGCG CGTGAAGTAT CAGACGATCT GTTGGATAAG
TTGTTGCCGT GGCTTATGCA GCATCGCGTG TTAGGCGACG ACGAAGTACG CCGCGACTTG
CGTCGCTGGG TGCCGGAATA TCAACCGGCA AGCTCGCCGA CGCTTCACAG CGTCGCCGCG
TTTCCCCGTG CTTCGTAG
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| Protein sequence | MLRSKAAWLS FSAFLFDLCA VAAAWLIAYI IRFNGLVPED FRLGAMHSLV WVLPTYGIMF
RIFGLYRGMW VFASLPDLVR ISKAVIAGAL VAMVVSVLVQ PMPIVPRSVL VVSPLFLFLA
MGGSRALYRA TKEFYLYGGL VAQGKPVVVL GAGNAGASLA RELSRSSEWR LVGLLDDDVS
KHGREIYGYK VFGSISELPQ LAETLKTEYA IIAIPSATVD VQRRVATLCV RAGVRALVLP
ALTDVTQGQA FLSRVRQIDL EDLLGRDPIN IDTPHVEALL HDRVVMVTGA GGSIGSELCR
QILRFQPAQL IAYDLSEFAI YRLTEELSER FPGVSVIPVI GDAKDSLLLD EVMSRHTPHI
VFHAAAYKHV PLMEEQNAWQ AVRNNVLGTY RVGRAAIRHD VKHFVLISTD KAVNPTNVMG
ASKRLAEMAC QALQQTSPRT QFETVRFGNV LGSAGSVIPK FQQQIAKGGP VTVTHPEITR
FFMTIPEASQ LVLQASSMGH GGEIFILDMG EPVKIVDLAR DLIRLYGFNE EQIRIVFTGL
RPGEKLYEEL LACDETTTRT PHPKLRTARA REVSDDLLDK LLPWLMQHRV LGDDEVRRDL
RRWVPEYQPA SSPTLHSVAA FPRAS
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