Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3605 |
Symbol | |
ID | 4002665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 950075 |
End bp | 951142 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637946037 |
Product | OmpC family outer membrane porin |
Protein accession | YP_557436 |
Protein GI | 91782230 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000104312 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA GTATCGTACT GCCGGCCGTC ATCTCGGCGT TACCCATCCT CGCATGGGCT CAGAGCTCGG TTACCCTGTA TGGAACTGTG GATACATCCG TTGCCTACGT CAGAGCTGCA GGGCAGGGGT CCAAAACATC GCTCGAAGAC AGCGGCGAAA ACGCTTCCCG ATTCGGATTA ATTGGCAACG AAGATCTCGG CGGCGGTCTC TCTGCAGGCT TCACGCTCGA AAGCGATATC TTCCCCAGTA GCGGGTTAGG CGGAACCACC AACACGAACA ATCAGAAAAG CGGCGTCGCG ACTGCCATGT TCAATCGCAG ATCGTTCATC AACCTCACAT CGAAAACATA CGGTGAACTG CGCTTGGGGC GCGACTACTC GCCGTCCTAT TGGAACGTAG CAAAATACGA CCCCTTTGTA CACGAAGGAA TCGGGAGCGC GGCGGTCAGG GATCTGACAG ACACGGGCAT TACGGGCGTG CGTACGTCGA ACACGGCGTT CTATCTCACG CCAGATACGT TAGGCGGCTT TTTTGGCGAG GTCGCATACG GTCTGGGTAA CAACCCGCAG AACTTACCCG ATGGCACCGG CCATGACGGC AACTACGCAG GATTCCGGGT CGGCTATATC GGGCACGGAG CGAACGTGGC GATTGCGGGC GGCAAGACGA CCTATCTGGC AGGCGACGTC CGGGTGCTCA ACTTCGGTGG CACTTACAAC TTCAATATTT TCACTGTCTA CGGTTTTTAC CAGCAGGCCG AAGTCGGCGG AACGGCTTCG CAGACGCAGT CGACCATTCT CCTTGGGGGA ATGGTTCCGG TCGGCGTGAA TGCGGTGCGC TTCTCGGCGA TCGAACAACA CATTCATGGC GATTCTTCGC TTGACTCTCA ACAACTGGCG ATAGGCTACG TCTACAACCT TTCCAAGCGC ACCTCGCTAT ATGCGACCTA CGCATTTCTC AACAACCATA AGAATGCCAA GGGCGGATTA CAGGAAACGT CGATTCTGGC ACCGCAGCCG GGTGGCAACG TCAACGGTGT GCAACTGGGT ATCAGCACAT TGTTCTGA
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Protein sequence | MEKSIVLPAV ISALPILAWA QSSVTLYGTV DTSVAYVRAA GQGSKTSLED SGENASRFGL IGNEDLGGGL SAGFTLESDI FPSSGLGGTT NTNNQKSGVA TAMFNRRSFI NLTSKTYGEL RLGRDYSPSY WNVAKYDPFV HEGIGSAAVR DLTDTGITGV RTSNTAFYLT PDTLGGFFGE VAYGLGNNPQ NLPDGTGHDG NYAGFRVGYI GHGANVAIAG GKTTYLAGDV RVLNFGGTYN FNIFTVYGFY QQAEVGGTAS QTQSTILLGG MVPVGVNAVR FSAIEQHIHG DSSLDSQQLA IGYVYNLSKR TSLYATYAFL NNHKNAKGGL QETSILAPQP GGNVNGVQLG ISTLF
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