Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3583 |
Symbol | |
ID | 4002687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 974518 |
End bp | 975780 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637946059 |
Product | major facilitator superfamily efflux pump membrane fusion protein |
Protein accession | YP_557458 |
Protein GI | 91782252 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0766049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCCAAAAGCC CGCGGCTGCT ACACAGCCGA CTCAGCCGGC CCCGCAGCCG AGGCAACCGG CCCAACCGCC GGCGAACAAC GGCAAACGCA AGCGCACGAT GACGCTGCTC GTCATCGTGA TCCTGATCGC CGCGCTCGCC TACGGCCTGT ACTACTTCCT CGTCGCGCGC TTCCACGAAG ACACCGACGA CGCGTACGTG AGCGGCAACG TCGTGCAGAT CACGCCGCAA GTCACGGGCA CCGTGGTCGC CGTGAACGCG GACGACACGC AAGTGGTCAA GGCGGGCGAT CCGCTCATCG TACTCGATCC GGCCGACGCA CGCGTGGCGC TCGAGCAGGC CGAGGCGAAT CTCGCGCAAA CGGTACGCCA GGTGCGCGGC CTGTTCGCCG ACGACAACCA GTACCAGGCG CAAGTCGCAC TGCGTCAGTC CGATCTGTCG CGCGCCCAGG ACGACCTGAA GCGCCGTCTG ACGGTCGCGC AAACCGGCGC GGTATCGCAG GAAGAAATCT CGCACGCCCG CGACGCGGTG AAGAGCGCGC AAGCCGCCGT CGACGCCGCC CAGCAGCAAC TGGAGTCGAA CCGCGCGCTG ACCGCCAACA CCACGATCGC GAACCATCCG AACGTGCAGG CCGCCGCCGC GAAGGTCCGC GACGCGTACC TGAACCACGC GCGCAACGTT CTGCCTGCGC CGGTGACCGG CTACGTCGCA AAACGCTCGG TGCAGGTCGG CCAGCGCGTC TCGCCCGGCA CCCCGTTGAT GGCCATCGTG CCGCTTCACG ACGCGTGGGT CGACGCGAAT TTCAAGGAAG TGCAGCTCAA GCACATGCGC ATCGGTCAGC CGGTGGAACT GACAGCCGAC GTGTACGGCT CGTCGGTGCC GTATCACGGC AAGGTGGTCG GCTTCTCGGC GGGCACGGGT TCGGCGTTCT CGCTGCTGCC CGCGCAAAAC GCCACCGGCA ACTGGATCAA GGTGGTGCAG CGTCTGCCGG TGCGTATCGC GCTCGATCCG CAGGAACTCG ACAAACACCC GCTGCGCATC GGCCTGTCGA TGCAAGCCGA CGTGAACATC AAGGACGACA CCGGCGGCCA GCTCGGCCAG GCGCCGAACA CGGCCTACCA GACCAACGTC TTCGATAAAT ACGGCGACGA AGCCGACGCG GAAATCGCTC GCATCATCGC GGAAAACGCC GGGCTCGAGA CCACAACACA GAGAGTCGAA CACCAAAAAA ATCCCGGCCA GAAGCCACTG TAA
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Protein sequence | MSTTQKPAAA TQPTQPAPQP RQPAQPPANN GKRKRTMTLL VIVILIAALA YGLYYFLVAR FHEDTDDAYV SGNVVQITPQ VTGTVVAVNA DDTQVVKAGD PLIVLDPADA RVALEQAEAN LAQTVRQVRG LFADDNQYQA QVALRQSDLS RAQDDLKRRL TVAQTGAVSQ EEISHARDAV KSAQAAVDAA QQQLESNRAL TANTTIANHP NVQAAAAKVR DAYLNHARNV LPAPVTGYVA KRSVQVGQRV SPGTPLMAIV PLHDAWVDAN FKEVQLKHMR IGQPVELTAD VYGSSVPYHG KVVGFSAGTG SAFSLLPAQN ATGNWIKVVQ RLPVRIALDP QELDKHPLRI GLSMQADVNI KDDTGGQLGQ APNTAYQTNV FDKYGDEADA EIARIIAENA GLETTTQRVE HQKNPGQKPL
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