Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3580 |
Symbol | |
ID | 4002690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 978039 |
End bp | 979583 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637946062 |
Product | major facilitator superfamily multidrug efflux transporter |
Protein accession | YP_557461 |
Protein GI | 91782255 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTTT CGAACGCCTC TTACACAGTC ATCCCTGCCC GAACGCGTGC ATTGATCACC ATCTCGGTCA TGCTCGCCAC CATCATGCAG GTGCTGGACA GCACGATTGC CAACGTGGCG CTTCCCCATA TGGAAGGCAG TCTGTCGGCC ACCCAGGATC AGATCACCTG GGTCCTGACG TCGTATATCG TGGCTGCAGC AATCGGCACA CCACTCACCG GCTGGCTGGC AGCGCGCTTT GGACGCAAGC GTCTTTTTCT GTGGTCGGTC GTCGGCTTCA CCCTTGCATC CGTCGCTTGC GGAATGTCGA CGTCACTGGC GGAAATGGTC GCAGCGCGAC TGCTTCAGGG CATGTTCGGC GCATCGCTGG TACCGCTCTC GCAGGCAGTC ATGCTGGACA TCAATCCGCC TGAAAAGCAT GGACCGGCGA TGGCCCTCTG GGGCGCTGGC GTCACCGTTG GACCGATCCT CGGCCCCACG CTCGGCGGCT GGTTGACGGA TAACTACAAC TGGCGGTGGG TGTTCTATGT GAACGTGCCG GTCGGTATCG TTGCTCTTCT CGGCATCCTG CTTTTCATGA TGGAGACGAA AGTAAACTCA CGCAAACTCG ACCTGTTCGG ATTTGCTACC TTGAGCATTG CCATCGGTGC CCTGCAACTT TTCCTGGACC GCGGTGAAGT ACAGGACTGG TTCGATTCGA TCGAAATCTG GATCGAGTTG CTAACTGCAC TGATCGCGTT CGCCTTCTTT CTTGTGCATA CGTTAACGGT TGAAACCACG TCGTTCTTCA ATCGCGAACT GGCGCGCAAT CGCAACTTTG TGATCGGTTG CGGATTCTAT TTTGTGATGG GCGCGGTGCT ATACGCGACG CGCGCCTTGC TGCCGCCGCT TCTGCAAAAT CTCATGCGGT ACTCCGTGGT CCAAACGGGA CTTGCTACCG CGCCCAGTGG CGCCGGCACA ATGATCGCCA TGATGATGGC TGGCCGGCTT GTCGGTCCGC TCAAGCCACG TAACCTGATC GCCATCGGCT TTTCGATCGC CGCCTTCTCG CTGTGGCAGA TGTCGCACTA CAACCTGTAC ATGGCGGAGA CCACGATTAT CTGGTCGGGT TTCCTCCAGG GCCTTGGGCT CGGCTTCATT TCGGTTCCGC TCACAACCGC GACCTTCTCC ACTCTTGCCG CTCAACTGCG CGGCGACGGC ACATCCATCT ATAGTCTGAG CCGCAATATT GGCAGCAGTA TCGGTATTTC CTTTGTACAG ACTGAACTCA CGCGTAACAC GCAGGTAGCG CATTCATCGC TGGTCGAACA CATCAACGTC TATAACCCGC TCGCGCAGCC AGATACCTTG CCATCCACGT GGGACATCCA TTCGTCCGCT GGACTGGCCT CACTGAATGT CGAAGTCACC CGGCAGGCAT CGATGATTGC ATATGTGGAT GACTTCAGAC TCCTGTTCCT GCTGGCGCTT GCCGTTATGC CATTCCTGTT GCTGTTAGAG ACGCCTCGAG CACGGCGTCA AATCCCCGCC GTGCCAGAAC ATTGA
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Protein sequence | MPVSNASYTV IPARTRALIT ISVMLATIMQ VLDSTIANVA LPHMEGSLSA TQDQITWVLT SYIVAAAIGT PLTGWLAARF GRKRLFLWSV VGFTLASVAC GMSTSLAEMV AARLLQGMFG ASLVPLSQAV MLDINPPEKH GPAMALWGAG VTVGPILGPT LGGWLTDNYN WRWVFYVNVP VGIVALLGIL LFMMETKVNS RKLDLFGFAT LSIAIGALQL FLDRGEVQDW FDSIEIWIEL LTALIAFAFF LVHTLTVETT SFFNRELARN RNFVIGCGFY FVMGAVLYAT RALLPPLLQN LMRYSVVQTG LATAPSGAGT MIAMMMAGRL VGPLKPRNLI AIGFSIAAFS LWQMSHYNLY MAETTIIWSG FLQGLGLGFI SVPLTTATFS TLAAQLRGDG TSIYSLSRNI GSSIGISFVQ TELTRNTQVA HSSLVEHINV YNPLAQPDTL PSTWDIHSSA GLASLNVEVT RQASMIAYVD DFRLLFLLAL AVMPFLLLLE TPRARRQIPA VPEH
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