Gene Bxe_A3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3580 
Symbol 
ID4002690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp978039 
End bp979583 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content57% 
IMG OID637946062 
Productmajor facilitator superfamily multidrug efflux transporter 
Protein accessionYP_557461 
Protein GI91782255 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTT CGAACGCCTC TTACACAGTC ATCCCTGCCC GAACGCGTGC ATTGATCACC 
ATCTCGGTCA TGCTCGCCAC CATCATGCAG GTGCTGGACA GCACGATTGC CAACGTGGCG
CTTCCCCATA TGGAAGGCAG TCTGTCGGCC ACCCAGGATC AGATCACCTG GGTCCTGACG
TCGTATATCG TGGCTGCAGC AATCGGCACA CCACTCACCG GCTGGCTGGC AGCGCGCTTT
GGACGCAAGC GTCTTTTTCT GTGGTCGGTC GTCGGCTTCA CCCTTGCATC CGTCGCTTGC
GGAATGTCGA CGTCACTGGC GGAAATGGTC GCAGCGCGAC TGCTTCAGGG CATGTTCGGC
GCATCGCTGG TACCGCTCTC GCAGGCAGTC ATGCTGGACA TCAATCCGCC TGAAAAGCAT
GGACCGGCGA TGGCCCTCTG GGGCGCTGGC GTCACCGTTG GACCGATCCT CGGCCCCACG
CTCGGCGGCT GGTTGACGGA TAACTACAAC TGGCGGTGGG TGTTCTATGT GAACGTGCCG
GTCGGTATCG TTGCTCTTCT CGGCATCCTG CTTTTCATGA TGGAGACGAA AGTAAACTCA
CGCAAACTCG ACCTGTTCGG ATTTGCTACC TTGAGCATTG CCATCGGTGC CCTGCAACTT
TTCCTGGACC GCGGTGAAGT ACAGGACTGG TTCGATTCGA TCGAAATCTG GATCGAGTTG
CTAACTGCAC TGATCGCGTT CGCCTTCTTT CTTGTGCATA CGTTAACGGT TGAAACCACG
TCGTTCTTCA ATCGCGAACT GGCGCGCAAT CGCAACTTTG TGATCGGTTG CGGATTCTAT
TTTGTGATGG GCGCGGTGCT ATACGCGACG CGCGCCTTGC TGCCGCCGCT TCTGCAAAAT
CTCATGCGGT ACTCCGTGGT CCAAACGGGA CTTGCTACCG CGCCCAGTGG CGCCGGCACA
ATGATCGCCA TGATGATGGC TGGCCGGCTT GTCGGTCCGC TCAAGCCACG TAACCTGATC
GCCATCGGCT TTTCGATCGC CGCCTTCTCG CTGTGGCAGA TGTCGCACTA CAACCTGTAC
ATGGCGGAGA CCACGATTAT CTGGTCGGGT TTCCTCCAGG GCCTTGGGCT CGGCTTCATT
TCGGTTCCGC TCACAACCGC GACCTTCTCC ACTCTTGCCG CTCAACTGCG CGGCGACGGC
ACATCCATCT ATAGTCTGAG CCGCAATATT GGCAGCAGTA TCGGTATTTC CTTTGTACAG
ACTGAACTCA CGCGTAACAC GCAGGTAGCG CATTCATCGC TGGTCGAACA CATCAACGTC
TATAACCCGC TCGCGCAGCC AGATACCTTG CCATCCACGT GGGACATCCA TTCGTCCGCT
GGACTGGCCT CACTGAATGT CGAAGTCACC CGGCAGGCAT CGATGATTGC ATATGTGGAT
GACTTCAGAC TCCTGTTCCT GCTGGCGCTT GCCGTTATGC CATTCCTGTT GCTGTTAGAG
ACGCCTCGAG CACGGCGTCA AATCCCCGCC GTGCCAGAAC ATTGA
 
Protein sequence
MPVSNASYTV IPARTRALIT ISVMLATIMQ VLDSTIANVA LPHMEGSLSA TQDQITWVLT 
SYIVAAAIGT PLTGWLAARF GRKRLFLWSV VGFTLASVAC GMSTSLAEMV AARLLQGMFG
ASLVPLSQAV MLDINPPEKH GPAMALWGAG VTVGPILGPT LGGWLTDNYN WRWVFYVNVP
VGIVALLGIL LFMMETKVNS RKLDLFGFAT LSIAIGALQL FLDRGEVQDW FDSIEIWIEL
LTALIAFAFF LVHTLTVETT SFFNRELARN RNFVIGCGFY FVMGAVLYAT RALLPPLLQN
LMRYSVVQTG LATAPSGAGT MIAMMMAGRL VGPLKPRNLI AIGFSIAAFS LWQMSHYNLY
MAETTIIWSG FLQGLGLGFI SVPLTTATFS TLAAQLRGDG TSIYSLSRNI GSSIGISFVQ
TELTRNTQVA HSSLVEHINV YNPLAQPDTL PSTWDIHSSA GLASLNVEVT RQASMIAYVD
DFRLLFLLAL AVMPFLLLLE TPRARRQIPA VPEH