| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3558 |
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| Symbol | |
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| ID | 4004899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1003420 |
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| End bp | 1004802 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637946083 |
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| Product | Outer membrane protein (CymD) |
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| Protein accession | YP_557482 |
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| Protein GI | 91782276 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0239673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.823203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA AATATGTTGC TGTGGCGACA GGGTGCCTCG TTGTTATGCT CTGGGGCGAA
AAGGTGTGGG CAACCGATGC ATTCAATCTG ATTGGCCACG GTCCGGTGTC GATCGGCATG
GGCGGAACCG CTGCGGCTTA CGATATCGGT CCGGCGGGCA TGATGTCCAA CCCGGCCACG
TTGACGTTCA TGCCGGACGG AACCTACTTC CTTATTGGCG CTGATATGGT CTCGGCTGAC
CTCAAAGTAA CCAGCACGGC GACTGGCGAG ACGGCAAACT CGTACAGTCG CGGGAGAAAC
AACGGTCCGT ATTTCGGGCC GGAGTTCGCC TTTGTCTGGC GAAAGGATCG CATTGCGCTG
GGCGTCGGGG CCTATGCAAC CGACGGTGTC GGCACGCAGT ATGGCACGGA CAGTTTCCTG
TCTCGCACGG CTACCAACAA CGTCGACACT GGGCTGGATG TATTCTCCAG ACTGCTTGTC
ATGGACATTC CGTTCTCGGT CGCCTACAAG GTCACTGACA AGCTCACCAT CGGCGGATCG
ATCGATGCGG TATGGACTTC GGTGAACCTA GGCTTGCTGC TCGATACCAC GCAGATCGGT
GCGCTCGCTG CGCAAGGCCG TCTTTCCGGT GGACTTGTGC CGGCACTGCT TGGAATACCC
CAGCTCTCGG GGGGCTACCT CAATTTCAAT AACGGGAAGA TTGCGGGTGG GGCGGCCTCG
GCCTGGGGCG TAGGAGGAAG GCTTGGTCTG ACCTACGCAG TCAATCCGAC GACAAGGGTG
GGTCTTGCTT ACCAGTTCAA GACATCGGTG GGCGACCTCT CCGGGCGCTC CACGCTGACT
GCGGTGAGTG CAGTGGCCGG CAATATCCCG TTAAGCGGTA CAGTCAGGCT GCATGATTTC
CAGATGCCGG CCACGTTCAC GGCCGGTATC AGTCACGACT TTACAGACCG GTTCACGGTT
GCAGTCGACT ATCAGCGTGT CTTCTGGTCC GGTGCAATGA AAGACATTCA GGTCGGATTC
ACGCAGGACG GAACCGGGCA GACGCTGAAG CTCGCGCTGC CGTTCAACTA CCGGGACATC
AACGTCTTTT CGATCGGCGG TCAATACCGG TACAACGAAA GCTGGACGTT TCGCGCGGGC
TTCCACTATG CGCAGGAAGC AACGCCAGAT GCAGGGTTGA TGGCGATCCT GCCTGCGACG
CCGACGACCA ATGTGACCGC AGGCACTTCA TATTCGTTTA ACCAGAATAT GAAGGTGGAC
ATTGCCCTGG CATACGCTTT TCCCAAGACC CTTACCAACG GCAGTCTTCC GGATACCAGT
GTGCCGATCA AAGTCAGGCA CTCGCAGATT GCGGCGTCGC TCGCATTTAC AAAGCGGTTC
TAG
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| Protein sequence | MKTKYVAVAT GCLVVMLWGE KVWATDAFNL IGHGPVSIGM GGTAAAYDIG PAGMMSNPAT
LTFMPDGTYF LIGADMVSAD LKVTSTATGE TANSYSRGRN NGPYFGPEFA FVWRKDRIAL
GVGAYATDGV GTQYGTDSFL SRTATNNVDT GLDVFSRLLV MDIPFSVAYK VTDKLTIGGS
IDAVWTSVNL GLLLDTTQIG ALAAQGRLSG GLVPALLGIP QLSGGYLNFN NGKIAGGAAS
AWGVGGRLGL TYAVNPTTRV GLAYQFKTSV GDLSGRSTLT AVSAVAGNIP LSGTVRLHDF
QMPATFTAGI SHDFTDRFTV AVDYQRVFWS GAMKDIQVGF TQDGTGQTLK LALPFNYRDI
NVFSIGGQYR YNESWTFRAG FHYAQEATPD AGLMAILPAT PTTNVTAGTS YSFNQNMKVD
IALAYAFPKT LTNGSLPDTS VPIKVRHSQI AASLAFTKRF
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