Gene Bxe_A3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3548 
Symbol 
ID4004909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1012862 
End bp1013650 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637946093 
Product2-hydroxypenta-2,4-dienoate hydratase (CmtF) 
Protein accessionYP_557492 
Protein GI91782286 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAG AGAACGAAAT CGCCGAGCTG CTGTGGGACG CCCAGCAGCG CAAGGAGCCC 
TGTGATCCTG TACGGGGGCG CTTTGAGAAC AGGAGCGAGC AGGAGCAGGT GGCACTTGCC
TATTCGGTTC AGCAGATCAA CATCCAGCGC CAGGTGCAGG GTGGCAGGCG GATCGTTGGC
CGGAAGATCG GCCTGACGTC TCCTGCTGTC CAGAAGCAGC TTGGGGTCGA CCGTCCGGAT
TTCGGCACGC TGCTGGACGA CATGGCGGTC GTTGACGGCG AACCGATTGA CACGTCCCGG
CTGCTGCAGC CGAAGGTTGA AGCCGAGATC GCGCTCGTAC TTGATAAGGA CCTCACGTAT
GAGCGGCACA CCGTGGCCGA TCTGATCGGC GCCACCGCCT ATGCGCTGGC CGCCATCGAG
GTGGTCGGCA GCCGCATTGC AGGGTGGAAT ATCCGTTTCG TGGATACCGT TGCCGACAAC
GCGTCATCGG GACTGTTCGT TCTTGGCGCA CAGCCGGTTG CGCTGTCGAA GCTCGACCTG
GCCGGCGTAT CGATGCGGAT GACGCGCGGC GAGGAGACCG TCTCGCAAGG TGCAGGCGCG
GCGTGTCTGG GCAATCCGCT GAACGCGGCG CGCTGGCTTG CCGACACGCT CGTCCAGGTT
GGGACGCCAA TGCGCGCTGG CGACGTGATT CTGACTGGTG CCCTCGGCCC GATGGTTGCC
GTGCAGGCCA GCCAGACCTA CGTCGCTCAC ATTGACGGGT TTGCCCCTGT ACGGGCGATT
TTCTCCTGA
 
Protein sequence
MSVENEIAEL LWDAQQRKEP CDPVRGRFEN RSEQEQVALA YSVQQINIQR QVQGGRRIVG 
RKIGLTSPAV QKQLGVDRPD FGTLLDDMAV VDGEPIDTSR LLQPKVEAEI ALVLDKDLTY
ERHTVADLIG ATAYALAAIE VVGSRIAGWN IRFVDTVADN ASSGLFVLGA QPVALSKLDL
AGVSMRMTRG EETVSQGAGA ACLGNPLNAA RWLADTLVQV GTPMRAGDVI LTGALGPMVA
VQASQTYVAH IDGFAPVRAI FS