| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3495 |
|---|
| Symbol | |
|---|
| ID | 4002405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1066433 |
|---|
| End bp | 1067503 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637946143 |
|---|
| Product | putative threonine-phosphate decarboxylase |
|---|
| Protein accession | YP_557542 |
|---|
| Protein GI | 91782336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.220505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCC GCGTGAGCGA AGCGAACCAG GTGAAAAACG AACCCGGCGG CGCCGTGCGT
GCCGTCGCCC ACGGCGGCAA TCTGCACGAA GCGGCCCGAC GCTACGGCAT TCCCTACGCG
GACTGGCTCG ATCTGTCGAC GGGCATCAAT CCGCACGGCT ATCCGGTCCC ACCGGTTCCA
GCGGAACTCT GGCGCCGCCT GCCCGACGAT GGCGACGATT TCGCCGCCTG CGCCGCGCGC
TACTACGGCG CGCCCGACGC CGCGCACGTG CTGCCGGTCG CAGGCAGCCA GGCGGCGATT
CGCGCGCTGC CCGCATTGCT GCCGCGCGCA CGGGTCGGCA TTGCGCCGCT CACGTACGGC
GAATACGCGC CCGCGTTCGA ACGCAACGGC CATGAAGCGA CCCTGCTCGA TATCTCGCGC
GACACGCTGC CCGACACGCT CACCCATGCA GTCGTCGTGA ATCCGAACAA TCCGACCGCC
GAGCATCTGA GCACCGCGAA GCTGTTGCAC TGGCATGCGC AGTTGAGCGC GCGCGGCGGC
ACGCTACTGG TCGATGAAGC CTTCGCCGAT ACGATGCCCT CGGCCTCGCT CGCGGCGAAC
ACCCATCGCG AAGGCTTGCT CGTACTGCGC TCGCCGGGAA AGTTCTTCGG CCTCGCCGGC
GTGCGCGCGG GCTTCGTGCT CGGCGCGCCT GCGCTGCTCG AACGTTTGCG CCACACGCTC
GGCGCGTGGA CCGTCAGCGG GCCGGCACGT CACGCTGTCA AAGCCGCATT CGCCGATGTG
GACTGGCAAC GGCAGATGCG CTCGCGCCTC GAAGCCGACA GCGCGCGGCT GGTCGAGTTG
TTGCAGGCGC AACGTTTCGA CATGCGCAGC ACACCGCTCT TCGCGTGGAC TTGCGACGCC
CGCGCCGCCG CTTTGCATGA AGCTTTAGCG CGGCGCGGCG TATGGACACG TCTGTTCACG
CCGTCGGCAA GCGTCAGATT CGGCTTGCCC GCGAACGAGG CCGAATGGAC ACGCTTCAGC
GAGCGCTTGC ACGAGGCCGT TCGAGAGATC GACTCCATGC GAGCGGGTTG A
|
|---|
| Protein sequence | MKGRVSEANQ VKNEPGGAVR AVAHGGNLHE AARRYGIPYA DWLDLSTGIN PHGYPVPPVP
AELWRRLPDD GDDFAACAAR YYGAPDAAHV LPVAGSQAAI RALPALLPRA RVGIAPLTYG
EYAPAFERNG HEATLLDISR DTLPDTLTHA VVVNPNNPTA EHLSTAKLLH WHAQLSARGG
TLLVDEAFAD TMPSASLAAN THREGLLVLR SPGKFFGLAG VRAGFVLGAP ALLERLRHTL
GAWTVSGPAR HAVKAAFADV DWQRQMRSRL EADSARLVEL LQAQRFDMRS TPLFAWTCDA
RAAALHEALA RRGVWTRLFT PSASVRFGLP ANEAEWTRFS ERLHEAVREI DSMRAG
|
|---|
| |