| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3477 |
|---|
| Symbol | |
|---|
| ID | 4002384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1089441 |
|---|
| End bp | 1091726 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637946161 |
|---|
| Product | ornithine decarboxylase |
|---|
| Protein accession | YP_557560 |
|---|
| Protein GI | 91782354 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC GTTTTCCCGT CGTCATCATC GACGAAGATT TCCGCTCCGA GAACATCTCG
GGTTCCGGCA TCCGGGCTCT GGCCGAAGCC ATCGAGAAAG AAGGCGCGGA AGTGCTCGGG
TTGACGAGCT ACGGCGATCT GACTTCGTTC GCGCAGCAGT CGAGCCGCGC CTCGTGCTTC
ATCCTTTCGA TCGACGATGA CGAGCTGCTG CCGTACGTCG ATAACGTGGT GGTGGAAGGC
GAGACGCCGG AACTGGCCGC CGCGATCGTC GCGCTGCGCG CGTTCGTGAC CGAAGTGCGC
CGCCGCAACG CCGACATTCC GATCTTCCTG TACGGCGAAA CGCGCACCTC GCGCCACCTG
CCGAACGACA TCCTGCGCGA ACTGCACGGC TTCATCCACA TGTTCGAGGA CACGCCGGAG
TTCGTCGCGC GCCATATCAT CCGCGAGACC AAGGTGTATC TGGATTCGCT CGCACCGCCG
TTCTTCAAGG AACTGGTGCA GTACGCGGAA GAAGGCTCGT ACTCGTGGCA CTGTCCGGGC
CACTCGGGCG GCGTCGCGTT CCTGAAGAGC CCGCTCGGCC AGATGTTCCA CCAGTTCTTC
GGCGAGAACA TGCTGCGCGC GGACGTGTGC AATGCCGTCG ACGAACTTGG CCAGTTGCTG
GACCACACGG GCCCTGTCGC GGCTTCCGAA CGCAATGCGG CGCGCATCTT CAGCGCGGAC
CACGTGTTCT TCGTGACCAA CGGCACGTCC ACGTCGAACA AGATCGTCTG GCACGGCACG
GTAGCGCCGG GCGACATCGT GCTGGTGGAC CGCAACTGCC ACAAGTCGAT CCTGCACGCG
ATCACCATGA CCGGCGCGAT TCCGGTGTTC CTCACGCCGA CGCGCAACAA CTTCGGCATC
ATCGGGCCGA TTCCGCGCAG CGAGTTCGAG CCGGAAAACA TCAAGAAGAA GATCCTCGCG
AACCCGTTCG CGCGCGAAGC GCTCGCTAAG AATCCGGACC TCAAGCCGCG CATCCTGACC
ATCACGCAAA GCACGTACGA CGGCGTAATC TACAACGTCG AGATGATCAA GGAAATGCTC
GGCGACTGGC TCGACACGCT GCACTTCGAC GAAGCCTGGC TGCCGCACGC TGAATTCCAC
GAGTTCTATC AGGACATGCA CGCAATCGGC GCGGGCCGTC CGCGTATTGG TGCGATGGTG
TTCGCCACGC ACTCCACGCA CAAGCTGCTG GCCGGCATTT CGCAGGCTTC GCAGATCGTC
GTGCAGGATT CGAAGAACAG CCGCTTCGAC AAGCATCGTT TCAATGAAGC GTATCTGATG
CACACGTCGA CCAGCCCGCA GTACGCGATC ATCGCCTCGT GCGACGTGGC CGCGGCCATG
ATGGAAGCGC CGGGCGGCAC CGCGCTCGTC GAAGAGTCGA TCGCGGAGGC GTTGGACTTC
CGCCGCGCAA TGAGCAAGGT CGACGCCGAA TACGGCGACG ACTGGTTCTT CAAGGTGTGG
GGCCCAGACC AGTTCGCCGA AGAAGGCATC GGCTCGCGCG AAGACTGGAT GCTGCGTCCG
AACGATCCGT GGCACGGTTT CGGACCGCTC GCCGACGGCT TCAACATGCT CGACCCGATC
AAGGCGACCA TCGTTACGCC GGGTCTGGAT ATGGACGGCG GCTTCGGCGA GTCGGGCATT
CCGGCCGCGA TCGTCACGAA GTATCTGGCC GAGCACGGCA TCATCGTCGA GAAGACCGGG
CTGTATTCGT TCTTCATCAT GTTCACGATC GGCATCACCA AGGGCCGCTG GAATTCGATG
GTCACCGAAC TGCAGCAGTT CAAGGACGAC TACGACAACA ACCAGCCGCT GTGGCGCGTG
CTGCCCGAGT TCGTCTCGCA TCATCCCATG TACGAACGTG TGGGTTTGCG CGATCTGTGC
GAGCAGATTC ACAGCGTCTA CCGCGCGAAC GACATTGCGC GCCTGACGAC CGAGATGTAC
CTGTCGAGCA TGGAACCGGC CATGAAGCCG TCCGATGCGT TCGCCAAGCT CGCGCACCGC
GAGATCGACC GCGTGCCTAT CGACGAACTG GAAGGCCGCG TCACGTCGAT CCTGCTGACG
CCGTATCCGC CGGGCATTCC GCTGCTGATC CCGGGCGAGC GCTTCAACAG GACCATCGTC
AACTATCTGC GTTTCGCGCG CGAGTTCAAC GAGCGCTTCC CGGGTTTCCA CACGGACATC
CACGGGCTGG TCGGCGAAAC GATCAACGGA CGCATCGAAT ACTTCGTCGA TTGCGTTCGC
GCCTGA
|
|---|
| Protein sequence | MKFRFPVVII DEDFRSENIS GSGIRALAEA IEKEGAEVLG LTSYGDLTSF AQQSSRASCF
ILSIDDDELL PYVDNVVVEG ETPELAAAIV ALRAFVTEVR RRNADIPIFL YGETRTSRHL
PNDILRELHG FIHMFEDTPE FVARHIIRET KVYLDSLAPP FFKELVQYAE EGSYSWHCPG
HSGGVAFLKS PLGQMFHQFF GENMLRADVC NAVDELGQLL DHTGPVAASE RNAARIFSAD
HVFFVTNGTS TSNKIVWHGT VAPGDIVLVD RNCHKSILHA ITMTGAIPVF LTPTRNNFGI
IGPIPRSEFE PENIKKKILA NPFAREALAK NPDLKPRILT ITQSTYDGVI YNVEMIKEML
GDWLDTLHFD EAWLPHAEFH EFYQDMHAIG AGRPRIGAMV FATHSTHKLL AGISQASQIV
VQDSKNSRFD KHRFNEAYLM HTSTSPQYAI IASCDVAAAM MEAPGGTALV EESIAEALDF
RRAMSKVDAE YGDDWFFKVW GPDQFAEEGI GSREDWMLRP NDPWHGFGPL ADGFNMLDPI
KATIVTPGLD MDGGFGESGI PAAIVTKYLA EHGIIVEKTG LYSFFIMFTI GITKGRWNSM
VTELQQFKDD YDNNQPLWRV LPEFVSHHPM YERVGLRDLC EQIHSVYRAN DIARLTTEMY
LSSMEPAMKP SDAFAKLAHR EIDRVPIDEL EGRVTSILLT PYPPGIPLLI PGERFNRTIV
NYLRFAREFN ERFPGFHTDI HGLVGETING RIEYFVDCVR A
|
|---|
| |