| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3470 |
|---|
| Symbol | |
|---|
| ID | 4002391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1097632 |
|---|
| End bp | 1098678 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637946168 |
|---|
| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_557567 |
|---|
| Protein GI | 91782361 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.595538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACA ACCTCAAAGC ACAATGCGCC GCACTCGCCG TGCTCGCGTT CACCGCCGCG
GCCACCCAGG CAGCGGAGAC GCTTTCCGTC GTGACCTTCG GCGGCGCGTA TGAAGCGGCC
GCGAAGAAGG CCTATTTCGA GCCGTTCACG CAGGCCACCG GCATCGGCTT CTCGACCGAA
TCGTATGACG GCGGTCTCGC CAAGCTCTCC GCGATGGAGC AGGCGAAGAA CACCACGTGG
GACCTGATCG ACCTCGAAAC GAACGACGCG ATCACCGCCT GCGACGAAGG CCTCCTGCAG
AAGTTCGACA AGAAGTCGCT CGGCAAGACG AGCGACTTCA TCCCCGGCTC GATCAGCGAT
TGCGCGGTCG CGAGCATGGT CTGGTCCACG GTCTACGCCT ACGATGCAAG CAAGCTCAAG
ACCGCGCCGA CCACCGTCAA CGACTTCTTC GACCTGCAGA AATTCCCTGG CAAGCGCGGC
CTGCGCAAGT CGCCGAAGGT CTCGATGGAA TGGGCGCTGA TCGCCGACGG CGTCGATCCC
AAGGATGTCT ACAAAGTGCT CGGCACGCCC GCCGGCGTGG ATCGCGCGTT CAGGAAACTC
GATACGATCA AGAAGAGCAT TGTGTGGTGG GAGTCGGGCG CGCAGGCGCC GCAGTTGCTC
GCGGACGGCG CGGTGGTGAT GACGCAGGCC TACAACGGCC GCATCGACGA CGCCGCGAAG
AAAGACAACA AGCCGTTCAA GGCCGTCTGG GACGCGCAGG TCTACGACTT CGACTGGTGG
GGCGTGCCGA CCGGCGCGAA GCATGCCGAC GCGGCCGCGA AGTTCATCGT CTCGGCTTCG
CAGCCGAAGG CGTATGCGGA CCTGACGAAA TACATCGCCT ATGCGCCGCC GCGCAAGGAC
GCGATCGCGC TCATCGACAA GCAGCGCCTC GCCGATCTGC CGACGTCACC GCAGAACTTC
AAGCGCGCAT TGCAGATCAA CGCAACCTTC TGGGCCGACA ACGCGGACCA GATCAACAAG
CGCTTCCAGG TGTGGCTGAC GCAGTAA
|
|---|
| Protein sequence | MRNNLKAQCA ALAVLAFTAA ATQAAETLSV VTFGGAYEAA AKKAYFEPFT QATGIGFSTE
SYDGGLAKLS AMEQAKNTTW DLIDLETNDA ITACDEGLLQ KFDKKSLGKT SDFIPGSISD
CAVASMVWST VYAYDASKLK TAPTTVNDFF DLQKFPGKRG LRKSPKVSME WALIADGVDP
KDVYKVLGTP AGVDRAFRKL DTIKKSIVWW ESGAQAPQLL ADGAVVMTQA YNGRIDDAAK
KDNKPFKAVW DAQVYDFDWW GVPTGAKHAD AAAKFIVSAS QPKAYADLTK YIAYAPPRKD
AIALIDKQRL ADLPTSPQNF KRALQINATF WADNADQINK RFQVWLTQ
|
|---|
| |