| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3448 |
|---|
| Symbol | |
|---|
| ID | 4001990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1121997 |
|---|
| End bp | 1123112 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637946190 |
|---|
| Product | ABC sugar transporter, ATPase subunit |
|---|
| Protein accession | YP_557589 |
|---|
| Protein GI | 91782383 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0130307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCC TTTCCATCCG TGACGTGTAC AAGACTTACC CGAACGGGGT GCCGGTTCTG
AAGGGTGTCA ACATCGACAT CGAAGACGGC CAGTTCCTGA TTCTCGTCGG CGGTTCGGGC
TGCGGGAAGT CGACGCTGCT CAACATGATT GCCGGCCTCG AAACCGTGAC CAAGGGCGAG
ATCCAGATCG ACGGCAAGAC GGTGAACAAC CTGTCGCCGA AAGATCGCGA TATCGCGATG
GTGTTCCAGT CGTACGCGCT GTATCCGTCC ATGACGGTGC GCGAGAACAT CTCGTTCGGC
CTGAACATCC GCAAGGTGCC GAAGCAGGAG CAGGCGCAGA TCGTCGAGCG CGTGTCGAAC
ACGCTGCAGA TCACGCACCT GCTGGATCGC AAGCCGGGCC AACTGTCCGG CGGCCAGCGT
CAGCGCGTGG CAATGGGCCG TGCGTTGGCG CGCGATCCGG TCATGTTCCT GTTCGACGAA
CCGCTGTCGA ACCTCGACGC GAAGCTGCGT ATCGAGATGC GTTCGGAAAT CAAGCTGCTG
CATCAACGCC TCGGCACGAC GATCGTCTAC GTGACGCACG ATCAGATCGA AGCCATGACG
CTCGGCGACC GCATCGCGGT GATGAAAGAC GGCATCGTGC AGCAGTTCGG CGCGCCGCAG
GACATCTACG ACTCGCCGTC GAACCTGTTC GTGGCGGGCT TTATCGGCGC GCCGCCGATG
AACTTCATCC AGGGCAAGCT GGTCGACCAG GGCGCGGGCG TGGCGCTCGA ACTCGATACG
GGTGTCGCGC GCACGGCGCT GAACCTGCCG TTCGACTCCG CGAAGGTGAA GTCGCACGTG
GGCCGTGACG TGATTCTCGG CCTGCGTCCG GAACGCATCA CCGACGCGCG CGGCGCGCAT
GGCGACAACG CGAAGCTGCA ACCGATCGAA GTGAAGGTCG ACGTGATCGA GCCGACCGGC
CCGGACACGC TGGTGTTCGC GCAGATCAAC GGCAAGCGCA TCGTGAGCCG CGTGCACCCG
GCTTCGAATC CGCAGCCGCT GACGAACACG ACGCTGCTGT TCGATACCTC GAAGGCGGTG
CTGTTCGATC CGACCAACGA AGAGCGGATC GCCTGA
|
|---|
| Protein sequence | MASLSIRDVY KTYPNGVPVL KGVNIDIEDG QFLILVGGSG CGKSTLLNMI AGLETVTKGE
IQIDGKTVNN LSPKDRDIAM VFQSYALYPS MTVRENISFG LNIRKVPKQE QAQIVERVSN
TLQITHLLDR KPGQLSGGQR QRVAMGRALA RDPVMFLFDE PLSNLDAKLR IEMRSEIKLL
HQRLGTTIVY VTHDQIEAMT LGDRIAVMKD GIVQQFGAPQ DIYDSPSNLF VAGFIGAPPM
NFIQGKLVDQ GAGVALELDT GVARTALNLP FDSAKVKSHV GRDVILGLRP ERITDARGAH
GDNAKLQPIE VKVDVIEPTG PDTLVFAQIN GKRIVSRVHP ASNPQPLTNT TLLFDTSKAV
LFDPTNEERI A
|
|---|
| |