| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3335 |
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| Symbol | |
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| ID | 4002182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1249114 |
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| End bp | 1251474 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637946303 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_557700 |
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| Protein GI | 91782494 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.874837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.708119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT CCCGCTTCTC AGACCAGCGC GAAGCCAAAC CTCACCGCGA TCCCGCGGTG
TCGCGCCGTC GCGCGTTTCT CGCTATTCCC GCGCTCGGCG TTCTGGTCCT GATCCTGCTT
TGGACGGTGA TCTTCGCGCG TCTCTCGGTC GAGAAAGAAG CCACGTATCG TGAGGCAATG
GCCTCTGCCG CAATTCTTTC CGCGGCGCTG GAGCAGCACA CGGTCAAGGC GATTCACCAG
GTCGACCAGA TCACCCGCTT CGTCAAATTC GAGTTCGAGA AGACGCCGAA TCATTTCGAT
CTCGCGAGCA CGGTGGAAAA AGGCGTCGTG CAAAGCGAGA CGCTGGTGCA GGTGTCGCTG
ATCGACGAAC ACGGCACGCT GATCGCCAAC ACGGCCGAAC TCAATCCCCG CCACATCGAC
CTGTCCGATC GTGAACACTT CAAGGTTCAC GAACACGAGA ACGACGACCA GTTGTATATC
AGCAAGCCTG TGCTCGGCCG CGTGTCCGGC CACTGGACCT TGCAGATGAC GCGGCGCCTG
AATCATCCGG ACGGCTCGTT CGCGGGCGTG GTGGTGGTTT CCGAAGACCC CAGCTATTTC
ACCTCCGACT TCTACAACAA CGCGGCGATC GGCCGTGAAG GCGTGATCGC GGTGATCTCG
GACAGCGGCG CCGTGCTGGC GCGCCGCACC GGCACCGCCG ACACCGCGAG CGGCGCATTC
TCGGCGAGCG GCTCGTATCC GACCTCGGAG CACGTCTCGG GCACCTATGT CGATTCGATC
GACAACGTCA CGCGCATCGT GTCGTACCGG CATATCGACG GCTATCCGCT CGGCGTGCTG
GTGGGTCTGT CGCAAGCGGA AGAATTCGCC GACTACAACC ACACGCGCAA CGTCTATCTG
CTGATGGCGG GTTTCATCTC GCTCGCCATG CTGAGCTTCT TCGCGGTGGC CACTGGTCTC
ATCGGCAAGC TGCTCGGCCG CGAGCGCGAA ATGACCCATC TGGTCGAATA CGATCTGCTC
ACCGGCCTGC GCAATCGCTA TGCCACGCTG CAAAGCCTTC GGCACGACGT CGCGCAACCG
GCCAACCTCG GCCGCCTCGC GATCCTCTTC ATCGACCTCG ACAACTTCAA GACCGTCAAC
GACACGCTCG GCCACAATGC CGGCGACATC GTGCTGCAAA TGACGGCCTC GCGGCTCGCC
ATCGCGGTCG GCGACGGCGG CGCGTTGAGC CGCATCGGCG GCGACGAGTT CGTGGTCGTG
ATCAAGGGCG AGGACGTCGA GAAGCGCGCC GTCACGCTGG CCGAAGCCGC GGCCGAAGCA
TTCGCCAAGC CGTTCGAAGT ACGTGGCAGT TCGTTCGTGC TGCATGCGAG CATCGGCATT
GCGCTTTACT CGGTCGCCAA CGAAAGCGAG ATCGACCTGC TGAAAAAAGC CGACCTCGCC
ATGTACAGCG CGAAAGACGC GGGCAAGAAC TGCTACCAGT TCTATTCACC GCAGTTGTCG
CATCGCGCCG ATCATTTGAT GAAGTGGGAA CAGCAATTGC GCGTGGCGCT CGCCGAAGGG
CAACTGTTCC TAGCCTATCA ACCGAAGATC GATCTGACAC GCCGCTGCAT CACCGGTTTC
GAGGCGCTGG TGCGCTGGAA CCATCCGCAG CACGGTCTGA TTCCGGCGAA CGAATTCATT
CCGGTGGCCG AATCGACCGG CCTGATCGTG CCGATCGGCG ACTTCGTGAT CGAGACCGCG
TGCCGTCAAC TCGCGCTGTG GCAGCAACAG GGCTACGACA CGCTGTCGCT CGCGGTGAAT
ATCTCGGCGG TGCAGTTCTG GCGCGGCGAT CTGTACGAAA CCATCTCGCA CGCCATCGAG
GAAAGCGGCA TTTCCGCACG CCGCCTCGAA CTGGAAATCA CTGAAACGGC GATGATGGAA
TATCCCGAAC TCGTCTCGGA GAAAATCTTC GCGTTGAAGC GCCTCGGCGT GCGCATCGCG
CTCGACGATT TCGGCACCGG TTATTCGTCG CTGTCCTACC TGAACCGTTT CTCGGTGGAC
ACGCTGAAAG TGGACCGTTC GTTCATCCAG GCAATTCCGG GCGACCGCAG CGTCTGCGTG
ATGGTCACCG CGATCGTCAA CCTCGCGCGT TCGCTCGGGC TCACGGTGGT GGTCGAAGGC
ACCGAGACCG AAGAGCAGAT CGCCTGGCTT GCCGCGCTCG GCCATATCGA GGCGCAAGGC
TTCCTGTTCT CGCGGCCGGT GCCGGTGGAC GCGATTCCCG CGCTGCTGGA ACGCTTCGGC
GTCTGCGGCA TGGCGGGCCC GGGCCGACGC GCCGCGCACG ATGCGGACAA CACCACCAGC
GTGTCCAGCA CCAACACCTG A
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| Protein sequence | MSQSRFSDQR EAKPHRDPAV SRRRAFLAIP ALGVLVLILL WTVIFARLSV EKEATYREAM
ASAAILSAAL EQHTVKAIHQ VDQITRFVKF EFEKTPNHFD LASTVEKGVV QSETLVQVSL
IDEHGTLIAN TAELNPRHID LSDREHFKVH EHENDDQLYI SKPVLGRVSG HWTLQMTRRL
NHPDGSFAGV VVVSEDPSYF TSDFYNNAAI GREGVIAVIS DSGAVLARRT GTADTASGAF
SASGSYPTSE HVSGTYVDSI DNVTRIVSYR HIDGYPLGVL VGLSQAEEFA DYNHTRNVYL
LMAGFISLAM LSFFAVATGL IGKLLGRERE MTHLVEYDLL TGLRNRYATL QSLRHDVAQP
ANLGRLAILF IDLDNFKTVN DTLGHNAGDI VLQMTASRLA IAVGDGGALS RIGGDEFVVV
IKGEDVEKRA VTLAEAAAEA FAKPFEVRGS SFVLHASIGI ALYSVANESE IDLLKKADLA
MYSAKDAGKN CYQFYSPQLS HRADHLMKWE QQLRVALAEG QLFLAYQPKI DLTRRCITGF
EALVRWNHPQ HGLIPANEFI PVAESTGLIV PIGDFVIETA CRQLALWQQQ GYDTLSLAVN
ISAVQFWRGD LYETISHAIE ESGISARRLE LEITETAMME YPELVSEKIF ALKRLGVRIA
LDDFGTGYSS LSYLNRFSVD TLKVDRSFIQ AIPGDRSVCV MVTAIVNLAR SLGLTVVVEG
TETEEQIAWL AALGHIEAQG FLFSRPVPVD AIPALLERFG VCGMAGPGRR AAHDADNTTS
VSSTNT
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