| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3326 |
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| Symbol | |
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| ID | 4002115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1261943 |
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| End bp | 1263766 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637946312 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_557709 |
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| Protein GI | 91782503 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.644925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGC ACGAAACAGA TTCACCACTA TGCGCCTCGT TGTCCAACGA CGTCGCCACG
ATCACCGCGC ACGCCGACGC CTGCTTCGCA GCAGGACACC ATCATGAAGC GATTGCCGCT
TACGGGCGAG TCCTCGCGGA ACAACCGCAC AACGTACACG CGCTCCACCG TCTCGGCCTC
GCGTCATTTC GCGTCGATCG GCCCGAACGG TCGCGCGAGT ATCTGGACCG GGCCCTGAAC
ATTGCGCCGG GGCGCGCGGA TATCTGGGAG CATCGCGGCC TGATTGCCGC GCTGGGCGGC
GAGTTGATCG CGGCCGAAGC GTTCTACCAT CGCGCCATGA GCCTGGGTGG CGGCACCGCG
AGCCTGCATC GCAATCTGGG CGACTGTCTG AAGCTGTCGA CGCGCCTCGC CGAGGCATGC
GGGCACTACC TCGAAGCGCT CGAACGCGAG CCGGCGTTGC ATCATGCCGT GCGCGCGCTT
GCGCGAATCA GTACGGAGCT CGATCGCCGC GAGGACGCAG CGGACTACTG GCTACGCGCG
TGGGCGCTCG ACTCGACGCA TCTGCCGGAC GCGCTCGAAC TGATCGTGGC GCTGTCCGCG
GCGCAGCGCG ATGCGCAGCT CGACGACCTG CTCGCCGCGC TGCGCAGCCG TTTCGCCGCG
GACGCGTTCG CGCTGCAACA GGTGGCTTAT GCGCTGAACG GCGTGGAGCG TTTCAGGGAC
GCAGTGAGTG TTGCCGTCGA AGGCCTCGGC GTCGATCCGC ACAACGGCTG GCTGCATCAC
AACGCGTCGT TTGCGTTCAA CATGCTGGGC GAGTTCAGCG CCATGCATGC CCATGCCGTC
GAAGCCGCGC GGCTGATGCC CGATCATCCG CTGATGCAAT TCAATCTGGC GGCCGCACAA
CTGCGCGCGG GCGATTTCCG AAACGGCTGG AGACAATACC GGTGGCATGA CGCGCTGCCG
GAAAATCGCG ATCTGGCTTG CCCCGCTTAT CCGGAGTGGC GGGGGGAGCC GGTGGCGGGG
CGCCGCTTTC TGCTCGTCGG CGAACAGGGG CTTGGCGATC AGTTGCAGTT CCTCGGCATG
GCCGACTGGC TGCATCGGCA TGGCGCGCGG GTCGACGTCT GGGTCGAGGT TCCACTCGGC
GACGTGGCGC ATCTCGCGGC CGGTGTGCAT GCCGCGTGGA CCACCGAGCC GCCCGGCCCA
TACGACTACT GGTGCCGGAT GCTCAGAATG CCCGAGCCCA TGAAGCTGGA TCTGCCGATG
TTGCCGCTCG CCACGTCTTA TCTGCGCGCG GCGCCGGCCC AGGTGCAGCG CTGGCGCAGC
CGCCTCGACG CAATCGGCCC GCTGGCGGCG CGCGGTCCGT TCAGAAAACG AGTCGGCATT
GTCTGGGCCG GCAATCCGGC GTACGGGCTC GATCGCTACC GGTCTATTCC GTTGCCGCAA
TGGCTGCCGG TTCTGGAGCA GACCGGCGTG AGATGGTTTT CGCTGCAAAA GGGCGAAGCG
CAGAACGAGG CGGTGGCGTG GCGCGCGGAT ATCGGCCTGC ACGGGCTCGG GCCGGAGATC
GGCACGTTCG CCGATACGCT GGCGATCGTG CAGTCGCTCG ATCTGGTCAT TACGGTGGAT
ACCGCGGTTG CCCATCTGGC CGGCGCGTGC GGCACGCCGG TCTGGGTGCT GGTGCCCACG
TTTACCGACT GGCGCTGGAT GACGGAGCGT GACGACAGTC CGTGGTATCC GTCGGCGCGT
CTGTTCAGGC AGCGCGAACT GGGGCGGTGG GATGCGGTGC TCGAAGAGGT CGCACACGCG
TTGCGCGAGT TTGTTGCCGG CTGA
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| Protein sequence | MLMHETDSPL CASLSNDVAT ITAHADACFA AGHHHEAIAA YGRVLAEQPH NVHALHRLGL
ASFRVDRPER SREYLDRALN IAPGRADIWE HRGLIAALGG ELIAAEAFYH RAMSLGGGTA
SLHRNLGDCL KLSTRLAEAC GHYLEALERE PALHHAVRAL ARISTELDRR EDAADYWLRA
WALDSTHLPD ALELIVALSA AQRDAQLDDL LAALRSRFAA DAFALQQVAY ALNGVERFRD
AVSVAVEGLG VDPHNGWLHH NASFAFNMLG EFSAMHAHAV EAARLMPDHP LMQFNLAAAQ
LRAGDFRNGW RQYRWHDALP ENRDLACPAY PEWRGEPVAG RRFLLVGEQG LGDQLQFLGM
ADWLHRHGAR VDVWVEVPLG DVAHLAAGVH AAWTTEPPGP YDYWCRMLRM PEPMKLDLPM
LPLATSYLRA APAQVQRWRS RLDAIGPLAA RGPFRKRVGI VWAGNPAYGL DRYRSIPLPQ
WLPVLEQTGV RWFSLQKGEA QNEAVAWRAD IGLHGLGPEI GTFADTLAIV QSLDLVITVD
TAVAHLAGAC GTPVWVLVPT FTDWRWMTER DDSPWYPSAR LFRQRELGRW DAVLEEVAHA
LREFVAG
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