Gene Bxe_A3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3323 
Symbol 
ID4002118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1265103 
End bp1266035 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID637946315 
Producthypothetical protein 
Protein accessionYP_557712 
Protein GI91782506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.810152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.626735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT TGATCAGGCG CGCTTCGGCT GAAGCGCGTG CCTTCCGCAA CCGTGACGCT 
GACGCCGCCG GCGGAAAACA GAAAACGCAG AAAGAGCACC ACGCCATGCG CAACAGGAAG
CGCGCTTCGC TCGACGACGA TCTGCGCGAC GCGCCGCAAA TCGAAGCGCC GCGCAAGCCC
CGTTTCGCAC CGGTGACGTT CTCGGAAGAG GGCGGCGTGC GCTTTCTGCA TTTCGGCACG
GAGTGGGTGC AAGGCGCGAT GCGTCTGCGC AAGCCGGATC ACATCGAACT CGAATACGCG
CAGCAGATGA TGGCCTGGCT GCTGTTCATC GAAACGCCGA AGCGCATCGT CCAGCTCGGT
CTGGGCGCCG CGGTGCTGAC CAGGTTCGCG TACCGCTTCC TGAAGCGCGC GAAGGTCGAG
GCGGTGGAAG TGAACCCGGC GGTCGTGGTG GCCGCGCGCA CGATGTTCGA ACTGCCGCAA
GACGACGCGC GCCTGACCGT GCACGAAGCC GATGCATGGG ACTTCGTCAA CGACCGCGCC
AATCACGGCA CGATCGGCGC GCTGCAGATC GACGTCTATG ACGCGACCGC GCGTGGCCCG
GTGCTCGACA GCGTGGGCTT CTATCGCGCG GTGCGCGCGT GCCTGACCGA CGCGGGCGTG
GTGACGGTGA ACCTGTTCGG CGATCATCCG AGCTTCGTGC GCAACATGAA GCGCCTGAAT
GAAGCCTTCG ACGGCCGCGT GGTCGCGCTG CCGGAAGTGC ACGACGGCAA CCGCATCGCG
ATCGCGTTTT CGGGGCCGCC GCTGAACGTG CCGTTCACGG CGCTGCAAGC GCGCGCGAAG
CTGATCGAAA CCGAACTCGG TCTGCCCGCG CGCAAGTGGA TCAAGGGATT GCAGGAATCG
ACCGGACAGA CCGGCGCCTC GTTCTCGATC TGA
 
Protein sequence
MTKLIRRASA EARAFRNRDA DAAGGKQKTQ KEHHAMRNRK RASLDDDLRD APQIEAPRKP 
RFAPVTFSEE GGVRFLHFGT EWVQGAMRLR KPDHIELEYA QQMMAWLLFI ETPKRIVQLG
LGAAVLTRFA YRFLKRAKVE AVEVNPAVVV AARTMFELPQ DDARLTVHEA DAWDFVNDRA
NHGTIGALQI DVYDATARGP VLDSVGFYRA VRACLTDAGV VTVNLFGDHP SFVRNMKRLN
EAFDGRVVAL PEVHDGNRIA IAFSGPPLNV PFTALQARAK LIETELGLPA RKWIKGLQES
TGQTGASFSI