| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3292 |
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| Symbol | dnaE |
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| ID | 4002379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1300249 |
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| End bp | 1303830 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637946346 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_557743 |
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| Protein GI | 91782537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCA TGTCAGATCC TCGCTTCGTT CATCTTCGCG TTCACTCCGA ATTCTCGATT
GCCGATGGCA TCGTGCGTCT TGACGACGTC GTCAAGGCCG CTGCCAAAGA CGGCCAGGGC
GCGCTCGCCC TCACCGATCT CGGCAACGCC TTCGGCCTCG TCCGTTTCTA CAAGGAAGCT
CGCGGCAAAG GGGTCAAGCC CATTGCCGGC TGCGACGTCT GGATCACCAA TCCGGACGAC
CGCGAAAAGC CCTCCCGTTT GCTGCTGCTC GTCAAAGACC GGCGCGGCTA CCTGAATCTG
TGCGAACTGC TCAGCAAGGC GTCGCTCACG AATCAGTATC GCGGCCGCGC GGAAATCGAG
GCCGGCTGGC TCGAATCCGG TCTGGGCGAA GGGCTGCTTG CATTGTCCGG CGCGCAGCAG
GGCGATATTG GCCTCGCGCT CGCGGCGGGT AACGAAGAAG CGGCAAAACG CAATGCACTG
CATTGGGCGA AGGTGTTTCC GGGCGGTTTT TATATCGAGG TGCAACGCTG CGGGCAGCCG
GGCGGCGAGC ACTACGTGCA GCAGGCGGTC GCGCTTGCGG CGTCGCTGAA ATTGCCGGTG
GTTGCCACGC ATCCCATGCA GTTCATGACG CCGGACGACT TCACCGCGCA CGAAGCGCGC
GTGTGTATTT CCGAAGGCGA CATTCTGGCC AATCCGCGCC GCTCGAAGCG CTTTACGCCC
GAGCAGTACT TCCGCACGCA GGAAGAAATG GCCGCGCTGT TCGCGGACAT TCCGTCGGCG
CTCACGAACT CGGTGGAAAT CGCCAAGCGC TGCAACCTTA CGTTGGAACT CGGCAAGCCC
AAGCTGCCGC TCTTCCCAAC GCCCGACGGC ATGTCGCTCG ACGACTACCT CGTGCATCTG
TCGAAAGAGG GTCTGGAAAA GCGCCTCGAG CAGTTGTATC CGGACGAGGC CGAGCGTGCC
GCACAGCGCG CGACGTATTA CGAACGCCTC GAATTCGAGT GCGGCACGAT CATCAAGATG
GGCTTTCCCG GCTACTTCCT GATCGTGGCG GACTTCATCA ACTGGGCGAA GAACAACGGC
GTGCCGGTCG GTCCGGGCCG CGGCTCGGGC GCGGGTTCAC TGGTCGCGTA CGCGCTCGGC
GTGACCGACC TCGATCCGCT GCGCTACAAC CTGCTGTTCG AACGTTTCCT GAATCCGGAG
CGGGTGTCCA TGCCCGACTT CGACATCGAC TTCTGCCAGC ACGGCCGTGA TCGCGTGATC
CAGTACGTGA AGGAAAAGTA CGGTGCGGAC GCCGTGTCGC AGATCGCCAC GTTCGGCACG
ATGGCGGCGA AGGCGGCGGT GCGCGACATC GGCCGGGTGC TCGATCTCGG CTACATGTTC
ACGGACGGCA TCGCCAAGCT GATTCCGTTC AAGCCGGGCA AGCACGTCAC GATCGCAGAC
GCGATGAAGG AAGAGCCGCT CCTGCAGGAG CGTTTCGACA ACGAAGACGA AGTGCATCAG
CTGCTCGAAC TCGCGCAGCG CGTGGAAGGG CTGACGCGGA ACGTCGGCAT GCACGCGGGC
GGTGTGCTGA TCGCACCCGG CAAGCTGACC GATTTCTGCC CGCTGTACAC GCAGGGCGAC
GAAAGCGGCG TCGTGAGCCA GTACGACAAG GACGACGTCG AAGCCGTCGG CCTCGTGAAG
TTCGACTTTT TGGGTCTCAC CACGCTGACG ATTCTCGACT GGGCCGAGCG CTATATCCGG
CGCCTCGATC CGTCGAAACA GGACTGGTCG CTCGCGCAGG TGCCGCTGGA CGACCCGGCG
TCGTTCTCGA TCCTGAAGAA AGCGAATACG GTCGCCGTGT TCCAGCTGGA AAGCCGCGGC
ATGCAGGGCA TGCTGAAAGA CGCGCAGCCT GACCGCTTCG AGGACATCAT CGCGCTGGTC
GCGTTGTACC GTCCGGGCCC AATGGACCTG ATCCCGAGCT TCTGCGCGCG TAAGCACGGC
CGCGAAGTGG TCGAGTATCC GGATCCGCGC GTCGAACCTG TTCTGAAAGA GACCTACGGC
ATCATGGTCT ACCAGGAACA GGTGATGCAG ATGGCGCAGA TCATCGGCGG CTATTCGCTC
GGCGGCGCCG ACTTGCTGCG CCGCGCGATG GGTAAGAAGA AGGCCGAGGA AATGGCCCAG
CATCGCGAGC TGTTCCGCCA GGGCGCCGCG AAAAACGGGC TGACCGGCGA GAAGGCCGAC
GAAATCTTCG ACTTGATGGA GAAGTTCGCG GGCTACGGCT TCAACAAGTC GCACGCGGCC
GCGTATGCGC TGCTCGCGTA CTACACCGCA TGGCTGAAGG CGCACCATCC CGCGGAATTC
ATGGCGGCGA ATATGTCGCT CGCTATGGAC GACACGGACA AGGTCAAGAT CCTGTTCGAA
GACTGCCTCG TGAACAAGAT GGCGGTGCTG CCGCCGGACG TCAATCTGTC CGCGTACCGC
TTCGAGCCGG TGGCCGAGCC TGACGGCAAG CGTTCGCGAA CGATCCGTTA CGGCCTCGGT
GCAATCAAGG GCAGCGGCCA GAACGCGATC GAAGAAATCC TGCGCGCGCG CGAGGAAGGC
CCGTTCATCG ACATCTTCGA TTTCTGCAAC CGGGTCGACC GCCGCATCGT CAATCGCCGT
ACGGTCGAAG CCTTGATCCG CGCCGGCGCT TTCGACAGCT TGCATGCGAA TCGCGCGCAA
CTGATCGCTT CGGTCTCGCT CGCAATGGAA GCCGCCGAGC AGGCGAGCGC CAACGCGCTG
CAAGCGGGCC TGTTCGACAT GGGCGACGCG CCGTCGCAAG GTCACGAACT GGTCGATGAG
CCGGAGTGGC CGGAAAAGAA AAAGCTGCAG GAAGAGAAGG CCGCACTCGG CTTCTACCTG
TCGGGCCATC TGTTCGACGC CTATAAGGAC GAAGTGCGCC GCTTCGTGCG CCAGAAGATC
GGCGAGCTGA AGGAAGGGCG CGACAAGCTG GTCGCAGGCG TGATCGCCTC GCTGCGCACG
CAGATGACCC AGCGCGGCAA GATGCTGATC GCGCTGCTCG ACGACGGCAC CGGCCAGTGC
GAAGTCACGG TTTTCAACGA GACGTTCGAA GCGCACAAGC AACTGTTCAA GGAAGACGAA
CTGCTGGTCG TGCAAGGTCA GGCGCGTAAC GACGCGTTCA CGGGCGGCAT CCGTTTCACG
GTCGACACGG TCATGGATCT CGGCCGCGCG CGCTGCCGTT ATGCGGAGGC CGTGAAGGTG
CAGATGAACG GCAATGCGGA CGCGCTGGCC TTGCGTCGTG TGCTCGAAGC GCATAGCGCG
GGCAAGGACG AACCGCAGGC GGCAGCGGCG CCGGCGGCTT CATCGCGTGG CGGAAACGGC
GGGGGCAACG GTGGTGGCCG TAACGGAGGC GGCTATGGCG GCGGTGGCCA GCGTCAGACG
GTGCAGATCC CGAACGGGCT TGCCGTGCAG GTGGTTTATC GTAGCCAGAA TGCCGAAGGT
GAAATGCGTC TGGGCGACGC ATGGCGCGTG AAGCCGACCG ACGAACTACT CGCGGCGCTG
CGCGGCGAGT TTGCCGGAAG CTCGATCGAG ATCGTTTATT GA
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| Protein sequence | MSPMSDPRFV HLRVHSEFSI ADGIVRLDDV VKAAAKDGQG ALALTDLGNA FGLVRFYKEA
RGKGVKPIAG CDVWITNPDD REKPSRLLLL VKDRRGYLNL CELLSKASLT NQYRGRAEIE
AGWLESGLGE GLLALSGAQQ GDIGLALAAG NEEAAKRNAL HWAKVFPGGF YIEVQRCGQP
GGEHYVQQAV ALAASLKLPV VATHPMQFMT PDDFTAHEAR VCISEGDILA NPRRSKRFTP
EQYFRTQEEM AALFADIPSA LTNSVEIAKR CNLTLELGKP KLPLFPTPDG MSLDDYLVHL
SKEGLEKRLE QLYPDEAERA AQRATYYERL EFECGTIIKM GFPGYFLIVA DFINWAKNNG
VPVGPGRGSG AGSLVAYALG VTDLDPLRYN LLFERFLNPE RVSMPDFDID FCQHGRDRVI
QYVKEKYGAD AVSQIATFGT MAAKAAVRDI GRVLDLGYMF TDGIAKLIPF KPGKHVTIAD
AMKEEPLLQE RFDNEDEVHQ LLELAQRVEG LTRNVGMHAG GVLIAPGKLT DFCPLYTQGD
ESGVVSQYDK DDVEAVGLVK FDFLGLTTLT ILDWAERYIR RLDPSKQDWS LAQVPLDDPA
SFSILKKANT VAVFQLESRG MQGMLKDAQP DRFEDIIALV ALYRPGPMDL IPSFCARKHG
REVVEYPDPR VEPVLKETYG IMVYQEQVMQ MAQIIGGYSL GGADLLRRAM GKKKAEEMAQ
HRELFRQGAA KNGLTGEKAD EIFDLMEKFA GYGFNKSHAA AYALLAYYTA WLKAHHPAEF
MAANMSLAMD DTDKVKILFE DCLVNKMAVL PPDVNLSAYR FEPVAEPDGK RSRTIRYGLG
AIKGSGQNAI EEILRAREEG PFIDIFDFCN RVDRRIVNRR TVEALIRAGA FDSLHANRAQ
LIASVSLAME AAEQASANAL QAGLFDMGDA PSQGHELVDE PEWPEKKKLQ EEKAALGFYL
SGHLFDAYKD EVRRFVRQKI GELKEGRDKL VAGVIASLRT QMTQRGKMLI ALLDDGTGQC
EVTVFNETFE AHKQLFKEDE LLVVQGQARN DAFTGGIRFT VDTVMDLGRA RCRYAEAVKV
QMNGNADALA LRRVLEAHSA GKDEPQAAAA PAASSRGGNG GGNGGGRNGG GYGGGGQRQT
VQIPNGLAVQ VVYRSQNAEG EMRLGDAWRV KPTDELLAAL RGEFAGSSIE IVY
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