| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3273 |
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| Symbol | |
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| ID | 4002109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1323416 |
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| End bp | 1325269 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637946364 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_557761 |
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| Protein GI | 91782555 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.773133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGAAA GCCGTTATCA TACGCACGGC TGCCCAAAAC ATTGGACTGG AGTTGCGCCG
CTTTACTCGG GACTTTACTG TTTGCGCGCG TCAAAAACAC GTTCGATCGC TTCGACTACT
CACGAATATC AAAAGGCTGG CGCGATGCAA GACCACCTCT ACGCCGCAGC GCGTCCGCGC
GACGCCGCGC TAGCGTCGGC GCCTTGCGGC ATGTTCATCT GCCGCGCGGA TGGCACGTTC
GATTCCGTCA ACGCCGCTTT CGAAAAGCTG ACTGGATTTG CGGCAGAGGA ACTGATCGGG
CGGCGCACTT TCGAATCTTT GCTCGATCCG GCCGAATTAG CGAGGCGCCG CGCCGAGCTT
CCGCAGCTTG AAATGGTGAC TTCGCGCTAC GAAAGCGAAT GGAGTTTCCT CAGGCGCAAT
GGCACGCCGA TTCGCGTGGT GCTGGCGTTG GCGCCGCTTG TCGCGGGGCC GGCGCATGCG
GGCGGTGCAG GCGCCGGACC GGCGTGTTAT GTGGGCATGG CATTCGACAT GACACGTTAC
GCGCAGTCGG AAGCGCGTCT CTGGTATGTC GCGCATCACG ACGGCGTGAC CCGTCTGCCG
AATCAAACGC TTTTTACTGA ACGGCTGGAG TTGACGATCG CGCGTTGCCA GCGCAACGGC
AGCGGTTTTA CCGTGCTGAT CGCCGAACTC GATCACTTGC GCAAACTGCG CGACGCGCTC
GGTTTGCACG CCGCCGAGCT CGTGCTGCAG ATCGTCGGTG AACGCTTGCG CGGCCTCTTT
CCAAACGACG GCACGATCGC CTCGATCGGC GGGACGCAGT TCGCGCTGCT GGTCAACGAA
ACCGGCGCAG CCGCCGATGC CTTCGCGGCC GAAGCGCTGG CCCGCATCGC CGAAGCCATC
GACTACGCCG GCACCGCGTT GAACATTACC GCGAGCATCG GCATCGTCGC TTATCCGGCC
GATGGTGGCG ATGCGCCTAC GCTGATGCGT CGCGCGGGCG TGGCGTTGTC GGCGGCATCG
GCCGTGACGG GCAATGCGGT GCGGCGCTTT TCCGCCGCGC TGGAAGGTCA GGCCGCGCGC
CGCTTCGAGC TGGAGACCAT GCTGCGTGAA GCGATCGAGC GTCAGCAACT GCATCTCGTG
TATCAACCGC AGGTGACGCT CTCCACTGGC CGTATCGCGC AAGTCGAAAC GCTGCTGCGC
TGGAACCATC CGCAGCGCGG GCTGATCAGC CCGGTCGAAT TCGTGCCGGT CGCGGAGGAG
GCGGGTCTGA TCGAGCAGAT CGGCGAGTGG GTGATCCGGA CCGCGTGCCG CGACGCCGGC
AAATTGCTGC GACTGACCGG CACGTTGCCG CGCTTCGCGG TGAATGTATC GCCGCAGCAG
TTCCAGCGGC AAAACCTGTT CGAGACGATT CGCGAAGCAC TCGATGAGGC CGCGCTCGAC
CCTTCCTACC TCGAAGTGGA AATCACCGAA GGAGTGCTGC TCGGCGACAC CGAGCAAGCT
TTGCAAACGC TCTTTGCGTT GCGCGAACTG GGCGTGGAAG TCGCGGTGGA CGATTTCGGC
ACCGGCTATT CGAGCCTCGC GTATCTGACG CGTTTCCCGC TGAATCGCCT GAAAATCGAC
CGCTCGTTCG TGATGCGCAT GAGCACGGAT TCGCAGTGTG AGGCGCTGGT CGGCGCCATC
ATCGCGATGG CGCATGCGCT CAAATCGCGC GTAACGGCCG AAGGCGTCGA AACGGCGGAG
CAGGCCGCGC AACTCGAAGC GCTCGGCTGT GACGAAGCGC AAGGCTTCTG GTTCTCGCGT
CCGATTACGG TTGGCGCGCT GCGGAATTTG TTGAGGCCGT TGGGCACACC CTAA
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| Protein sequence | MRESRYHTHG CPKHWTGVAP LYSGLYCLRA SKTRSIASTT HEYQKAGAMQ DHLYAAARPR
DAALASAPCG MFICRADGTF DSVNAAFEKL TGFAAEELIG RRTFESLLDP AELARRRAEL
PQLEMVTSRY ESEWSFLRRN GTPIRVVLAL APLVAGPAHA GGAGAGPACY VGMAFDMTRY
AQSEARLWYV AHHDGVTRLP NQTLFTERLE LTIARCQRNG SGFTVLIAEL DHLRKLRDAL
GLHAAELVLQ IVGERLRGLF PNDGTIASIG GTQFALLVNE TGAAADAFAA EALARIAEAI
DYAGTALNIT ASIGIVAYPA DGGDAPTLMR RAGVALSAAS AVTGNAVRRF SAALEGQAAR
RFELETMLRE AIERQQLHLV YQPQVTLSTG RIAQVETLLR WNHPQRGLIS PVEFVPVAEE
AGLIEQIGEW VIRTACRDAG KLLRLTGTLP RFAVNVSPQQ FQRQNLFETI REALDEAALD
PSYLEVEITE GVLLGDTEQA LQTLFALREL GVEVAVDDFG TGYSSLAYLT RFPLNRLKID
RSFVMRMSTD SQCEALVGAI IAMAHALKSR VTAEGVETAE QAAQLEALGC DEAQGFWFSR
PITVGALRNL LRPLGTP
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