| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3258 |
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| Symbol | upp |
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| ID | 4002298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1337330 |
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| End bp | 1337980 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637946379 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_557776 |
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| Protein GI | 91782570 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0567794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.970145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAGG ACAGCCGTTT CCCCAATCTC TTCATCCTCG ATCACCCGCT GATCCAGCAC
AAGCTGTCGC ACATGCGCGA CCGGGATACC TCGACGCGCA CGTTCCGCGA ACTGCTGCGT
GAAATCACGC TGCTGATGGG CTACGAAATC ACCCGCAATC TGCCCATGAC CACGCGCCGC
CTGACCACGC CGCTCGTCGA GATCGACGCG CCGGTGATCG CCGGCAAGAA GCTGGCGATC
GTGCCGGTGC TGCGGGCCGG CATCGGCATG TCGGACGGGC TGCTGGAACT GGTGCCCTCG
GCGCGGGTCG GCCACATCGG CGTGTATCGC GCGGAGGACC ATCGCCCGGT CGAATATCTG
GTGCGCCTGC CGGACCTCGA AGATCGCGTG TTCATTCTGT GCGATCCGAT GGTCGCGACC
GGCTACTCCG CCGTGCACGC CGTGGACGTG CTCAAGCGCC GCAACGTGGC GGGCGAGAAC
ATCCTGTTCC TCGCGCTGGT CGCCGCGCCC GAAGGCGTGC AGGTGTTCCA GGACGCGCAT
CCGGACGTCA AGCTGTATGT CGCCTCGCTC GATTCGCATC TGAACGAGCA TGCGTACATC
GTCCCCGGTC TCGGCGACGC CGGCGACCGC CTGTTCGGCA CGAAAAACTG A
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| Protein sequence | MTQDSRFPNL FILDHPLIQH KLSHMRDRDT STRTFRELLR EITLLMGYEI TRNLPMTTRR
LTTPLVEIDA PVIAGKKLAI VPVLRAGIGM SDGLLELVPS ARVGHIGVYR AEDHRPVEYL
VRLPDLEDRV FILCDPMVAT GYSAVHAVDV LKRRNVAGEN ILFLALVAAP EGVQVFQDAH
PDVKLYVASL DSHLNEHAYI VPGLGDAGDR LFGTKN
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