Gene Bxe_A3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3232 
Symbol 
ID4003071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1363692 
End bp1364255 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID637946405 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_557802 
Protein GI91782596 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.572855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAG ACAAGGAACT CGCCGATTTT CTGGCGGGCG TCGAAAGGCG CGCATTCAAG 
CAGACGGTCT ACGCCGTGCG GGACGACGAC GCCTCGCTCG ACATCGTGCA GGACGCGATG
ATCAAGCTCG CCGAAAAATA TGGCGATCGT CCGGCCGCCG AACTTCCGCT GCTGTTTCAG
CGTATTCTCC AGAATGCGAT GCACGACTAT TTCCGTCGTG CCAAAGTGCG CAATACCTGG
GTTAGTCTGT TTTCCTCGCT CGGCAACGCC GACGACGACG AATTCGACCC CCTCGAAACC
TTCGAGGCAC AGCAAGGCTC GGCGGGCGCC GAGAGCAACG AACAGAAACT CGAACGCGAA
CAGGTTCTGC AGTTAATCGA CGACGAGATC CAAAAATTAC CGGCACGTCA ACGGGAGGCG
TTTCTCATGC GTTATTGGGA AGATATGGAT GTCGCCGAGA CTGCCGCCGC AATGGGCTGC
TCCGAAGGCA GTGTGAAGAC GCACTGCTCG CGGGCCACCC ACACGCTGGC GCAAGCGCTC
AAGGCCAAAG GAATCACGCT ATGA
 
Protein sequence
MASDKELADF LAGVERRAFK QTVYAVRDDD ASLDIVQDAM IKLAEKYGDR PAAELPLLFQ 
RILQNAMHDY FRRAKVRNTW VSLFSSLGNA DDDEFDPLET FEAQQGSAGA ESNEQKLERE
QVLQLIDDEI QKLPARQREA FLMRYWEDMD VAETAAAMGC SEGSVKTHCS RATHTLAQAL
KAKGITL