| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3198 |
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| Symbol | |
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| ID | 4002012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1398438 |
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| End bp | 1399748 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637946438 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_557834 |
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| Protein GI | 91782628 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000108152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTG CGATACTCCA TCTGGCGTCA GGGTATGTCC GTTACCTCGC GCGCGCGCCC
GGGTTCCTCC ATTGGCTGAG ACCGTTCACC GATGCTACGT TATGCGTATT AAATACGCAG
GAGGAATTCG TGAGTAAGAA TAGTTGCATC GTTCGTTTCG ACTGGCGACA TGACCGTGTA
TCCGTCGGCC ATATCGCCGT CCGCGTGTCG GGACAGGAAA AAGACGTGCT CCGTCTGATG
GTGGAAAGCG CCGGACGTGT ATGCGACCGT GAAGCATTGA TGGGAGTCGT GTGGGGCGAG
CGTGCGATCC ATATGGACGA GCTCTATCTG ACACAACTGG TCTACCGGTT GCGCAAGTCG
TTGAGGCCGC TCGGCCTCGG CGACCATATC GTGACGATGC CCCGTACGGG CTATCGTTTC
GAGCCGGAAG GACTTCAGAT CGATACCGAC GAACCCGCGC CGGATGAAAC ACCTGCTCCG
GTTGGCGCCG CCGTCGCGGA GGAGCCCGCA CCGCGCCGCG CAACCCTTCG CAACTGGTTT
GCGCGGTTGC GCGGCGCCGT TGGCTGTCAG CGCGCGTCGT CCGGGTCGAT CGGCCTGCCG
GCCATTCATG GCGACGAGGG CGTGGTCACC CATGCCGGCG CAACCGTTCA TCTGACGGGC
TTCGAAAGCG CGTTGCTACA GGCCTTCGTC GAGCAGCCCG ATGTCACGCT GGAGCGCGAC
GAGTTGATTT CTCGGATCTG GGGCGATGAA CAGGACGTCG ACGTGAATCG ACTGACGCGG
CTGGTGTCAC GCTTGCGCCG TTCGTTGCAG CCGCTTGGGC TCGAGCGGCA ACTGGTCTAT
ATACCTTGCG TCGGATATCG ATTCTGCCGG ACTGCGCCGC CTTCGCCCGC CGACATCGGC
GGCGCCGGTG GTGCTGGCGG CTCGCTGCCG TGGTTGGCCG CCGTGCTTCA CTCGTTGTCG
CGCGCGCTTG CCAGGCTTAC GTGGATCGCG CCGTGGCTCG CCTCGCAGCG CACCGTCGTG
CTGATCGGCG CGGCGTTGTT CGCCCTTACG GCCGCGCTTG CCATGCCCGC GGACCTCGGC
AATGCGAGCC GCCCCGGCCG GCCTTTTGCC GCGCTAGACA CCGAAGATGG TGCGCCAATA
ACCTGTAGCG CCGATTACGT GCATCGCGTG TTCATTCGCG ATGTAGTCGA TTCGGTGGCG
GCGTCGAGTT CTCCGCCAGT GCCGGCTACC GTGGACAGCG CGTGGAAACG GATCGTCACG
GATTTGCACG CGGCGGGATG CCGTAATGTG GCAGCTTCCG CTCCGTCGTA A
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| Protein sequence | MEVAILHLAS GYVRYLARAP GFLHWLRPFT DATLCVLNTQ EEFVSKNSCI VRFDWRHDRV
SVGHIAVRVS GQEKDVLRLM VESAGRVCDR EALMGVVWGE RAIHMDELYL TQLVYRLRKS
LRPLGLGDHI VTMPRTGYRF EPEGLQIDTD EPAPDETPAP VGAAVAEEPA PRRATLRNWF
ARLRGAVGCQ RASSGSIGLP AIHGDEGVVT HAGATVHLTG FESALLQAFV EQPDVTLERD
ELISRIWGDE QDVDVNRLTR LVSRLRRSLQ PLGLERQLVY IPCVGYRFCR TAPPSPADIG
GAGGAGGSLP WLAAVLHSLS RALARLTWIA PWLASQRTVV LIGAALFALT AALAMPADLG
NASRPGRPFA ALDTEDGAPI TCSADYVHRV FIRDVVDSVA ASSSPPVPAT VDSAWKRIVT
DLHAAGCRNV AASAPS
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