| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3179 |
|---|
| Symbol | |
|---|
| ID | 4004758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1418479 |
|---|
| End bp | 1419633 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637946457 |
|---|
| Product | zinc carboxypeptidase |
|---|
| Protein accession | YP_557853 |
|---|
| Protein GI | 91782647 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.129073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.290427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAT CCATTACGAG CCACTTCGAC GCAGGCGCGA TCGAGGTGCT GTCCTGTGAA
GAAGCGGGCA AGATCCGTTT GCGCGTGCGG CCGGACAGCC ATGCCGAGTT TGCGCAGTGG
TTCTACTTCC GGTTATCCGG CGCGGCGGGC GAGCGCTGTG TGATGACCTT CGAAAATGCC
GCCGCGTGCG CTTTTGCCGA AGGCTGGCGC GACTATCAGG CCGTGGCGAG CTATGACCGG
GTGAACTGGT TCCGTGTGCC TACGTCGTAC GACGGCCGCG TGTTGACAAT CGATCACACG
CCGGATTTCG ACCGTATTTA CTACGCGTAT TTCGAGCCGT ACAGCGAGGA GCGTCATTCG
GAGTTTCTGG GCGCGGTGCA GCAGATGCCG CAGGCGACGC TCACGGAATT GGGCACGACC
GTCGAAGGCC GGCCCATGTC GTTGCTCACG CTCGGCACGC CGCAAACCGG CGACACGCCC
AAAAAGAAGA TCTGGCTGAT CGCGCGCCAG CACCCCGGCG AGACAATGGC CGAATGGTTT
ATCGAAGGTC TCGTGAAGCG GCTCGCAGGT TGGGGCGATT GGGCGGGAGA CCCGGTGGCG
CGCAAGCTCT ACGATCACGC TGTCTTCTAT ATCGTGCCGA ATATGAATCC GGACGGCAGC
GTGCACGGCA ATCTGCGCAC GAATGCGGCT GGCGCGAATC TGAATCGCGA ATGGATGGAG
CCGGATGCCG CGCGCAGCCC CGAGGTGCTG GTGGTGCGCG ACGCGATTCA CGCCACCGGC
TGCGACCTGT TCTTCGATAT TCACGGCGAC GAAGCGCTGC CTTACGTGTT CGTGGCCGGC
TCCGAAATGC TGCCGGGTTT CACCGAGCGG CAGCGGGAAG AGCAGCAGGC GTTTATCGAA
GCGTTCAAGC ATGCGAGCCC CGATTTCCAG GACAAGCACG GCTACGCCGC GAGCAAATAT
CGCGAGGACG CACTGAAGCT GGCGTCGAAG TACATCGGCA ACGAATTCGG CTGCCTGTCG
CTGACCCTGG AGATGCCGTT CAAGGACAAC GCCAATCTGC CCGACGAACG GGTGGGCTGG
AACGGCGAGC GTAGCGCGTC GCTTGGCGCC GCGATGCTTC AGGCGATCTT GCGGCACGTG
GAGACGTTTG CTTAA
|
|---|
| Protein sequence | MTLSITSHFD AGAIEVLSCE EAGKIRLRVR PDSHAEFAQW FYFRLSGAAG ERCVMTFENA
AACAFAEGWR DYQAVASYDR VNWFRVPTSY DGRVLTIDHT PDFDRIYYAY FEPYSEERHS
EFLGAVQQMP QATLTELGTT VEGRPMSLLT LGTPQTGDTP KKKIWLIARQ HPGETMAEWF
IEGLVKRLAG WGDWAGDPVA RKLYDHAVFY IVPNMNPDGS VHGNLRTNAA GANLNREWME
PDAARSPEVL VVRDAIHATG CDLFFDIHGD EALPYVFVAG SEMLPGFTER QREEQQAFIE
AFKHASPDFQ DKHGYAASKY REDALKLASK YIGNEFGCLS LTLEMPFKDN ANLPDERVGW
NGERSASLGA AMLQAILRHV ETFA
|
|---|
| |