Gene Bxe_A3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3138 
Symbol 
ID4002701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1466375 
End bp1467262 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID637946502 
Productglutamate racemase 
Protein accessionYP_557893 
Protein GI91782687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.478139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG AATCACCGTC CACGAACACC GGAACGTTCA CGTCTGGCGC CGGATCGCGT 
GCACCGGTCG GCATTTTCGA TTCGGGTCTC GGTGGTCTGT CGGTATTGCG GGCGGTGCGG
GCGCAATTGC CTGACGAAGC AATCCTGTAT GTCGCCGACT CGCTCTATGC CCCATACGGT
GAACGCGACG ACGATTTCAT CGCCGACCGC ACGCTCGCGA TCGGCGAATG GCTGGTCAGG
CAAGGCGCGA AAGCGCTCGT GGTCGCCTGC AATACGGCCA CCGCGCAATC CATCGCGATG
GTTCGCGAAA AGCTGCCCAT TCCGCTGGTC GGCGTCGAAC CCGGCATCAA ACCCGCTGCA
TTGCAGTCGA AAACCCGCGT CGCGGGCGTG CTCGCCACGC AGGTGACGCT GCGCAGCGCG
CGCTTCCAGG CGCTGCTCGA ACGCTACGCC GCGGATTGCC GCTTTCTTTG CCAGCCGGGC
CACGGACTGG TGCAGGCCGT GGAACGCTGC GACGTCGGCT CGGCCGAATT GCGGGCGTTG
CTGCGCGGCT ACCTGCAGCC CATGCTCGAC GCGGGCGCGG ATACGCTGGT GCTCGGCTGT
ACGCACTACC CGTTTCTCGA TACAGCGATC CGCGAGATCG TCGGCGATCG GCTCGCGCTG
ATCGATACGA GCGTCGCGAT TGCCCGTCAG CTGGAACGGG TGCTGGATCA ACACGGCCTG
CGCGCGGCGC CGGAAAGCGC CGGCACCGCT CTGCCCCGTT TTTATTCAAC CGGCGACGGC
ACCCATCAGC AGCAATTGGC GGCTACATTG CTGCATGTCG ATGCAACGGT CGAGCAGGTG
GTGATCCCGT CCCGCCGCAC GGTAGCGCCG AATTCCCAAG CCGCATAA
 
Protein sequence
MPAESPSTNT GTFTSGAGSR APVGIFDSGL GGLSVLRAVR AQLPDEAILY VADSLYAPYG 
ERDDDFIADR TLAIGEWLVR QGAKALVVAC NTATAQSIAM VREKLPIPLV GVEPGIKPAA
LQSKTRVAGV LATQVTLRSA RFQALLERYA ADCRFLCQPG HGLVQAVERC DVGSAELRAL
LRGYLQPMLD AGADTLVLGC THYPFLDTAI REIVGDRLAL IDTSVAIARQ LERVLDQHGL
RAAPESAGTA LPRFYSTGDG THQQQLAATL LHVDATVEQV VIPSRRTVAP NSQAA