| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3132 |
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| Symbol | |
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| ID | 4002707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1471985 |
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| End bp | 1474195 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637946508 |
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| Product | putative type III secretion hypersensitivity response secretion protein, HrcC/HrpA1- like |
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| Protein accession | YP_557899 |
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| Protein GI | 91782693 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.15642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0125341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA GGAGCCGCAA TGATTCGCCC AATAAGAAAG GTCGTGGTCG ACCGCAGTCC
CCGCCGCCGC GCGTGAGGGG CACTGCCGCG TTTCAGGTGG CCGCTCAGCT CGCGGCGGCC
TGGGTGGCGT TGCTGGTCCC GGCGGCTCAG GCTGCCATGC CGGTCTGGCA TGGTGCGCCG
ATCCACTACA CAGCGAACGG CACGCCGCTG CCCGACATGC TGCGCGACGT GCTCGCGGTG
GAGGGGCTGA CCGCGGACAT CGGCCGTGAC GTCAAGGGCG CGGTCAATGG CCGTTTCGAC
GATACGCCCG GCAATGTGTT CATGCAGCTG GTCGAGGCCT ACGGCCTGGT CTGGTATTTC
GACGGCAAGT CGATGCACGT CACGACCGCC GCGGGCGTGC GCAGCCAGGT GATTCCGTTT
GCGCCGATGA CTCGCGAAGC GGTTGCCTCA TTGCTGCGCA ACCTGGACCT CGACGACGCG
CGCCTGCCGA TCCGATACTC GGCGACGACC GCCAGGGTTG CCGGCCCGGC GGCCTTTGTC
GGCGCGGTAG CCGAGGCGAT CGACAAGGCG CAGCGGCAGA GCACGGCGGA GCCGTCGTTC
GATCAGACGG AGATCCGCAT TTTCCCGCTG CGCTACGCGC AGGCGCAGGA CATGCACTAC
TCGGTGGGCG CGCAGGATCA GGTAGTGCCC GGGGTCGCCT CGCTGTTGCG CAGGGTCATG
GCGGACGCCT GGCAGGCGAG CGCGCCGCGC GCGGCCCGCT CGCGCGCCGA GATCCGCAGC
GACGCCCGCA GCGCGCGCGG CGGCCCGCCG CCGCTGCCGA GCCTGCGCGG CCTGGGTCTT
GCCGGCGGCG CGCCCGCCGA TAGCGACGGC GATACGCCGC CGCCGCTGCC CGACGCGGGG
ACTTCTGATA CGGCCCGGAC CGACCAGCCC GGCGCGACGC CCGCGCGGCG CAACATCATC
GCGGATCCGC GTACCAACTC GGTGGTGATC AACGACCTCG CCTCGATGAT GCCGAACTAC
GAGCGCGCCA TCGCGATGCT CGATCAACCG CAGGAGCTGG TCGAAATCGA CGCGGTGGTG
ATCGACGTCT CGTCGAGCGC GGCGCGCTCG CTTGGCGTGG CCTGGGGCGG CTCGAACGGG
CGTATCAGCG GTTCGTCCGG CACCATCAAC TCGCCGTTGA CCTTCGGCGC GCCGGCCCTC
GCAACCGCGG CCGGCATGGC GAGCGGACTG AATCTCGCCA CCCTGGTCGG CAATTCGGCG
CAGTACCTGT TCGCGCAGAT CCACGCCCTG GAAGACGCCG GCCAGGCTCG TGTGCTGTCG
AGTCCGCAAG TCCTCACGCT GAACAACATG GAAGCGGTGC TGACGTCGCA CAGTTCGGTC
TACGTACGGG TTGCGGGCAA CCAGGACGTC GATCTGTACA ACATCGATAC CGGTCTTACG
CTGAAAGTGA CGCCGAGCAT CGAATCGGCC GCCGATCCGC GCCGCAATAT CCGGCTCAAC
ATCCAGATCG ACGATGGCGC GTTCAACACG TCGATGTCGG TCGACGGCAT TCCGAAGGTC
GACAACCATT CGATCGTCAC TCAGGCGATC GTGCGCGACG GCGAGAGTCT GCTGGTTGGC
GGGTATCAGT ACGAGCGCAG CGAAAGCACC ACCTCGAAAG TGCCCGTGCT CGGCGACGTG
CCATACCTCG GCGTGCTGTT TCGCGACACG CAGACGACCC GCGAGCGCCT CGAACGGCTG
ATCCTGATTA CGCCACGCCT CAAGCGCATG GTCGGCAATG GAGAGCCGGC CGGTGGGGCG
GTCATGGCGG GGCCGGTTGG GCTAGCCGCA GGCGCGGGGG AGGGGGCGGG CGCTGCGTCC
AACGCTGTGT TGGCGAACGG CGCGGGCAGC GCGCCGGGTT CTTCCGCGCA GGCGGCACAG
ATGACGCCGC CGTCGACGCT TCGGGTGGCC ACTAACGTGC CGTTGGGCAT CAACGTCTCA
CCGGCCATCA ACGTACCGGG CAGCGCCAAC GCCAACGCCA GCGCCAGCGC CAGCGCCAGC
GCCAACGCCA ACGCCAACGC GTCCGCCGCT GTCACCGCCG CGCTGCGGAC GCTCCCGGCG
AGCGCCGGCC CGGGTGCGCC GTTGCCGTCC GCGCCAGCGT CGTCGCCTCC GCCTCTGCCC
GCGTGGCAGT CGACGAGCAA GTTGCCGTGG GAGGACCGCC ATGACCGCTG A
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| Protein sequence | MPIRSRNDSP NKKGRGRPQS PPPRVRGTAA FQVAAQLAAA WVALLVPAAQ AAMPVWHGAP
IHYTANGTPL PDMLRDVLAV EGLTADIGRD VKGAVNGRFD DTPGNVFMQL VEAYGLVWYF
DGKSMHVTTA AGVRSQVIPF APMTREAVAS LLRNLDLDDA RLPIRYSATT ARVAGPAAFV
GAVAEAIDKA QRQSTAEPSF DQTEIRIFPL RYAQAQDMHY SVGAQDQVVP GVASLLRRVM
ADAWQASAPR AARSRAEIRS DARSARGGPP PLPSLRGLGL AGGAPADSDG DTPPPLPDAG
TSDTARTDQP GATPARRNII ADPRTNSVVI NDLASMMPNY ERAIAMLDQP QELVEIDAVV
IDVSSSAARS LGVAWGGSNG RISGSSGTIN SPLTFGAPAL ATAAGMASGL NLATLVGNSA
QYLFAQIHAL EDAGQARVLS SPQVLTLNNM EAVLTSHSSV YVRVAGNQDV DLYNIDTGLT
LKVTPSIESA ADPRRNIRLN IQIDDGAFNT SMSVDGIPKV DNHSIVTQAI VRDGESLLVG
GYQYERSEST TSKVPVLGDV PYLGVLFRDT QTTRERLERL ILITPRLKRM VGNGEPAGGA
VMAGPVGLAA GAGEGAGAAS NAVLANGAGS APGSSAQAAQ MTPPSTLRVA TNVPLGINVS
PAINVPGSAN ANASASASAS ANANANASAA VTAALRTLPA SAGPGAPLPS APASSPPPLP
AWQSTSKLPW EDRHDR
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