| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3123 |
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| Symbol | |
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| ID | 4002770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1479105 |
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| End bp | 1480076 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637946517 |
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| Product | putative type III secretion protein, FliN like |
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| Protein accession | YP_557908 |
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| Protein GI | 91782702 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0613641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00272793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTCT GGCACGACAT GGAGACCGTG ACGCTCGCGG ACGTCGAGCG CACCAACCTG
GCGATCCGCC ATTTCGGCCA TCCGCACGCG GTATCGGTCG GCGCACGGCG TTTCACGCTG
CAGTTCGAAG CGTGCCGCGC GCGCTATCCG CTGCGGGTGT CCGGGGTCGC CGGGCAGGTG
CCGTTCAGCG CCGGCTGCGA TGCCGGCGCG CTGCTGCCGG AACTGGCGCC GTCGGTCATC
GACGCGCGCG GCGACGCCGC GCTCGGGCAC GTCGCCGACG CGTTGAACGA CTGGCTATGC
GCGCTCGAGG GGCTGTTCGG CTTCACGATC GATCTGACCG GTGTCGCGTT CGACGGCGTC
CCGGAGCAGG GCGCGTACGG GCTCGCCGTG ACCCATACGG CAAGCGGTCG CGCCGCTCAT
TTTTCGTTTC TTAGCCCGGC GGTCGATGCA TGGCTGCAAC TGCGTGCGCC GCCCGTGCCG
TCCAGAGAGG CGTTGCTGAG CCGCCTGTAT GTGCGCCTGC CGATCTGCCT GCCGGGCCCG
TCGCTATCGG TGCCGCGCCT GCGCCGGATC GCAGCGGGCG ACGCGCTGCT GTTCGATCGC
CATTCGAGTT ACCTGCGCGT GCCGTTGCGA ATGGGCACGT GCCGGATCCT GTTGAAATTC
ACTGAGGAGT ACACCTTGAT AGACCATGTC ATGACTGATG AAACCCAGCC CGTCGAAATG
ACCAGCGAAT TGCTGCCGAT CGACTCGATC ACCTTCGCCT TCGAGGCAGT GCTCGGCACG
TTGTCGTTGT CGGTAGCCGA ACTGGCGCAT TTGCGCGAAG GCTCGATCGT CGCGTTCCGG
CTGCCGGCGC GCGAGCGCAA GGTCACGCTG CTCTGTCAGG GGATCCCGTT TGCCCGCGGC
GAGCTGATCG ATATCGAAGG CGCCCTCGGC GTGCGCGTTA CGCGGCTCAC CCAGGAGGAT
CTGCCGGCAT GA
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| Protein sequence | MNLWHDMETV TLADVERTNL AIRHFGHPHA VSVGARRFTL QFEACRARYP LRVSGVAGQV
PFSAGCDAGA LLPELAPSVI DARGDAALGH VADALNDWLC ALEGLFGFTI DLTGVAFDGV
PEQGAYGLAV THTASGRAAH FSFLSPAVDA WLQLRAPPVP SREALLSRLY VRLPICLPGP
SLSVPRLRRI AAGDALLFDR HSSYLRVPLR MGTCRILLKF TEEYTLIDHV MTDETQPVEM
TSELLPIDSI TFAFEAVLGT LSLSVAELAH LREGSIVAFR LPARERKVTL LCQGIPFARG
ELIDIEGALG VRVTRLTQED LPA
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