| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3110 |
|---|
| Symbol | |
|---|
| ID | 4002227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1498880 |
|---|
| End bp | 1499932 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637946531 |
|---|
| Product | putative phage integrase |
|---|
| Protein accession | YP_557921 |
|---|
| Protein GI | 91782715 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000337156 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000174724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGA AACGCCGGGC CGAAAACAAA GGCCTGCCTT TGCGGTGGCG ATTCATCCAC
GGCGCTTACT ACTACCGCGT CCCACCCGGG CTGGAGGCAT CATGGGACGG CAAGACGCAA
TTCCGGCTCG GCTCGACGCT CCCAGAGGCA TACAAAACTT GGGCGGACCG CCTGAGCACG
CTCGACGATG CGAAGACAAT CGGCGATCTT CTCGACCGGT ATGCGCTTGA GGTCGTACCA
AAAAAGGAAG TCACGACGCA GGCCCAGAAC GCCGTCGCGA TCAAGCGCCT GCGCGCCGTT
ATGGGCGCTC ACGCGCTCGG CGCCCTGAAG CCGCGTCACA TCTACCAGTA CGTCGACAAA
CGCGCCGCCA AGACATCGGC GCACCGCGAG GTCGAAGTGC TATCGCACGC CTTCACGATG
GCCGTGAAAT GGGGTTACCT CGACAGGCAT CCGTTTAAAG GGGAGGTCCG CCTCGACGGC
GAAAAGCCGC GCACGCGGTA TGTGGAGGAC TGGGAGATCG TCGAGTGCCT TTCGATCGAA
TCGAAGCGCA AGGCCGGCAG CGTTCTGGCC ATCCAGGCAT ACATGCGCCT GAAGCTGCTG
ACCGGCATGC GCCGAGGCGA CCTGCTTCGC CTGACGATGT CGGACCTCAA AGAGGACGGC
ATCCATGTGA TGCCCGGAAA GACCGAAGGG TCGACCGGCA AGCGGCTGAT TTACGAATGG
AGCGAGCAGC TGCGCGAGGC AGTGGACATG GCCAAGTCAG TGCGTCCGGT GAAGATCGCA
CCCTGGCTGT TCTGCAATCG CCGGGGAGAA TGCTACTTCA ACGAGACGAC CGGCCGCGCC
GGCGGATGGG ACACGATGTG GCGCAATTTC CTGACTCGCG TGCTCGAAGA GACGAAGGTG
CGCGAGCACT TCACCGAGCA CGATCTGCGG GCGAAGTGCG CCAGCGACGC GGAGACGCTC
GAGCACGCGC AAGCACTTCT GGCGCATGCC GACGGGAAGG TAACGCAGCG GATTTACCGG
CGAAAACCGG AGCGGGTTCG GCCCCTGCGC TGA
|
|---|
| Protein sequence | MPKKRRAENK GLPLRWRFIH GAYYYRVPPG LEASWDGKTQ FRLGSTLPEA YKTWADRLST
LDDAKTIGDL LDRYALEVVP KKEVTTQAQN AVAIKRLRAV MGAHALGALK PRHIYQYVDK
RAAKTSAHRE VEVLSHAFTM AVKWGYLDRH PFKGEVRLDG EKPRTRYVED WEIVECLSIE
SKRKAGSVLA IQAYMRLKLL TGMRRGDLLR LTMSDLKEDG IHVMPGKTEG STGKRLIYEW
SEQLREAVDM AKSVRPVKIA PWLFCNRRGE CYFNETTGRA GGWDTMWRNF LTRVLEETKV
REHFTEHDLR AKCASDAETL EHAQALLAHA DGKVTQRIYR RKPERVRPLR
|
|---|
| |