Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3034 |
Symbol | |
ID | 4002167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1553335 |
End bp | 1556124 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637946607 |
Product | putative diguanylate cyclase (GGDEF)/ phosphodiesterase (EAL) with PAS/PAC and Chase sensors |
Protein accession | YP_557997 |
Protein GI | 91782791 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000356382 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGCGCTCCG TCCTGCTGCC GCTGTTCGTG CTGACCGCGT CGCTCTGCGT GACGTGGACG GTATGGAATC ACGAACGGCA AGCAACCAGC AAAGAGCTGC GCACCCAGTT TGATTACACC CTGGGCGATG CCGTCAGCCG CATCGAACAG CGCATGGCGA GCTACGAGCT CATGCTGCGG GGCGTGCAGA GTCTGTTTGC CGCGAACGGA ACGATCGACC GCGACAGGTT CCGGCGCTAT GTCGGCGCGC TCAATCTCGA CGCGAACTTC TCCGGGATCC ACGCCGTCGG CGTCGTCGAA TGGGTGCCGG CGGCGCAGAA GGCGGGCCAC GTGGCGAGAA TGCGCGAGGA AGGCGTTCCC GGCTATACGA TCCTGCCCGA AGGGCAGCGT GAGGACTATG CGCCGCTCGT TCAGCGCGAG CCTTATGTCG GCATCACGCA AAGCTCGCCC GGCTTCGACA CCTGGAGCGA TCCGGTGCGG CGCGCCGCGA TGGAGCGAGC CCGCGACTCC GGCATGGCGG CGCTTTCGGG AACGGTGCAC CTTTTGATCG ACGCGGATTC GGACCTCCGG CCGGGTTTCA TCATGTACCT GCCGATCTAT GCGTCCGGTG AAACGCAGGA GAGCGTTCTG CAGCGGCGGG CGCACATTAC CGGCTGGGTC TACGCATCGT TCCGTATGCA CGACGTGATG GCGAGCCTCT ATGGCGAACA GCCCGCCGGC GTCTCGCTGG CCGTTTACGA CGGCGTAGCG GCATCGGACG CAGCGCTTCT ATATCGCACC CCGGCTGCGA ACGGGTGGCA TGCGCCCGCG CTGATGTCCG CAAACGAATA CCTGGTCGTG GACGGGCGCG ACTGGATGCT GTCGATGGAC GCCTCGGACG AATTCCGCTC CCGGCTGGGC AGTAACGCGG AGCCGTTGAT TGCAGGTGCC GGAATCGGGC TGAGTCTGCT GCTGGCGCTG CTGACCTGGC TGATGGTGAC AGGGCGTGAG CGCGCCATCC GTCTGGCTTC GGGGATGACA CGGGAGTTGC GCGAGAGCGA AGAGAAGTTT CGCGCCATTG CGGATTGCAC GGTGAATCTG GAGATCTGGT GGGGACCGGA CGGGAAACCG CGCTGGATCA ATCCGTCTGT CGATCACTAC ACGGGCTACA CGGTCGCCGA ATGCATGGCC ATGCCGAACT TCGCGCGCAC GCTGATTCAT CCGGATGACG TGGAGCGTGT TGCGCCGGAA TTTCAGAAAG GACTTCAGGG CTTTCGCGGC GACGATCTCG AGTTTCGTTG CGTGCGCAAG GATGGTTCGC TGCTGTGGCT CTCGCTCTCG TGGGTTCCGA TCAGCAATGC GAGGGGCGAC TTCGTCGGCT TTCGCACGAG CGGGCGCGAT ATCACCGAGC GCAAGAAGTC GGAAGAGAAG ATCCGGGAAC TGGCCTTCTA CGACACGCTG ACCCGCCTGC CCAATCGCGC ACTTCTTCTG GACCGGCTGA GGGAGTCGAT GGCGGCCAGC CGCGAGAACA ACGTCTGCGG CGCGCTCATG TTCATCGATC TCGATCACTT CAAGACGTTG AACGATACGC TCGGCCACGA CAAAGGCGAT CTGCTGCTGC GGCACGTCGC GTACCGGCTG TCCAGCAGTG TCAGCAAGGG AGACACAGTC GCGCGGGTGG GCGGTGACGA GTTCGTTGTC GTGCTGGGCA ATCTGAGCCT GAACAAGGCG GCCGCGACCG CGGAGACCGA GGCGGCGGGA GAGAAAATCC TCGCCGTGTT GGGCCGTGCC TACGAGCTCA ACGGGGTTCA GTTCCGCAGT ACCGCCAGCA TCGGCGTCAC CGTCTTCAAC GGAGAGCAGA CCTCCACTGA CGAACTGTTC AAACAGGCCG ATCTCGCCAT GTATAAATCG AAGGAGCGCG GCCGCAATGC CATGTGCTTC TTCGATCCCG CCATGCAAAC GACGGTGCTC AAGCGAGCCG AGCTCGAGGT GGGCTTGCGC AGTGCGATCG AGGAGAACCG CTTCGTTCTG CACTATCAGG CGCAAGTCGT CGACGGCGAT CATATAACGG GTGCCGAGGC ACTCGTGCGT TGGGAGCATC CGGTGTGCGG CCTGATACCT CCGGCGGAGT TCATTCCGCT TGCGGAGGAA ACGGGCCTCA TCCTCGAGAT AGGGCGAATG GTGTTGGAGT CCGCATGTGC GCAACTCGCG CTGTGGGCAA CAGAGCCGCA GATGGCGCAT CTGTCGATCG CAGTGAACGT GAGCGCCCGG CAATTCCGTG AGCCGGACTT CGTGGAGAGC GTGCTGGGTG TGATCAACCG GAAAGGAGCG AGGGCGGACC GGCTGAAGCT GGAACTGACC GAGAGCGTGC TCGTTGAAAA CGTCGAGGAC ATTATCGAAA AGATGGGCGC TCTTCGAGCG CGGGGCGTGA CGTTCTCTCT GGATGACTTC GGCATTGGAT ACTCCTCGCT GTCCTACCTG AAACGGTTGC CGTTGGACCA GCTGAAAATC GACCGCTCCT TCGTGCGCGA CATCCTGGAA GACCCCAACG ACGCGGACAT TGCGAGAACC ATCGTGGCGC TTGCCCGCAG TTTCGATCTC GGCGTCATCG CCGAGGGCGT CGAGACCGAG GCGCAAAGAG ACTTTCTTGC GGTAGCAGGA TGCCATGCCT ATCAGGGGTT TCTTTTCTGC AAACCGCTTC CCGTGCGGAG TTTCGAGCAG TTCGTGGCGA GCTTCGAATG CCGGGACCGG ATGGCAGACC GGCGGCGTGG TCGCGATGAG AGAAGCGTCG ATTCAGATAC GATGACCTGA
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Protein sequence | MRSVLLPLFV LTASLCVTWT VWNHERQATS KELRTQFDYT LGDAVSRIEQ RMASYELMLR GVQSLFAANG TIDRDRFRRY VGALNLDANF SGIHAVGVVE WVPAAQKAGH VARMREEGVP GYTILPEGQR EDYAPLVQRE PYVGITQSSP GFDTWSDPVR RAAMERARDS GMAALSGTVH LLIDADSDLR PGFIMYLPIY ASGETQESVL QRRAHITGWV YASFRMHDVM ASLYGEQPAG VSLAVYDGVA ASDAALLYRT PAANGWHAPA LMSANEYLVV DGRDWMLSMD ASDEFRSRLG SNAEPLIAGA GIGLSLLLAL LTWLMVTGRE RAIRLASGMT RELRESEEKF RAIADCTVNL EIWWGPDGKP RWINPSVDHY TGYTVAECMA MPNFARTLIH PDDVERVAPE FQKGLQGFRG DDLEFRCVRK DGSLLWLSLS WVPISNARGD FVGFRTSGRD ITERKKSEEK IRELAFYDTL TRLPNRALLL DRLRESMAAS RENNVCGALM FIDLDHFKTL NDTLGHDKGD LLLRHVAYRL SSSVSKGDTV ARVGGDEFVV VLGNLSLNKA AATAETEAAG EKILAVLGRA YELNGVQFRS TASIGVTVFN GEQTSTDELF KQADLAMYKS KERGRNAMCF FDPAMQTTVL KRAELEVGLR SAIEENRFVL HYQAQVVDGD HITGAEALVR WEHPVCGLIP PAEFIPLAEE TGLILEIGRM VLESACAQLA LWATEPQMAH LSIAVNVSAR QFREPDFVES VLGVINRKGA RADRLKLELT ESVLVENVED IIEKMGALRA RGVTFSLDDF GIGYSSLSYL KRLPLDQLKI DRSFVRDILE DPNDADIART IVALARSFDL GVIAEGVETE AQRDFLAVAG CHAYQGFLFC KPLPVRSFEQ FVASFECRDR MADRRRGRDE RSVDSDTMT
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