| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3024 |
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| Symbol | |
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| ID | 4001965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1567349 |
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| End bp | 1569526 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637946617 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_558007 |
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| Protein GI | 91782801 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.130505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACT TCGTAACGCG ACGCACCCTG ACGGTCAGCG GCGCGACGCT GCCGACCTTG
CCCGACGGCG AGCCGGCATT GCAGCTACGC ACCATCGCAG GGGAGGAAAC CCTGTCGACG
ATCTACGAAT ACGAGTTGAG CCTCGTCACA CCCGTCGATC CGCTGCTGCC GGACAGCACG
GCCGCCAACT TCGACCTGAA GGAGATGATC GGCGGGGAAC TGACGGTCAC CATCCAGCTC
GACGGCATGG GGACGTTCGT GCCGGGTATG GCCGGCGCCA GTGGCGCGGC GAATTTCGGC
GCCGGCATGC GTGAGATCAG CGGCATTGTG ACCGCGGCGA GTCTGGTGAG CCAGTTGAAC
CGCCAGTATC TCTACCGGTT GAAGATGCAG CCGTGGATCG TGCTTGCCGA GCGGCGCACC
GACTACCGGA TCTTCCAGAA CAAAACAGTC GTCGAGATCA TCGACGAGGT GCTCAAGAGC
AATTATCTCT ACTCCTACGT CAAGCGTCTG GGCGGCAGGT ATTCGAACCT GGTCTATCAG
GTTCAGTACG GCGAGTCGGA CTTCGCTTTC ATCCAGCGCC TGATGGCCGA ACACGGCATC
TACTGGTTCT TTGAGCACAG CAGGAGTTTT CACCGCATGG TGCTGGTCGA CAATCTCGGT
GCGCACAAAC CCGTGGAGAG TCTCGCGTAC CAGACGCTGT GGTACTACCC GCCGGGACAC
AAGATCGACC GCGAGTACAT CGAGGAATTC CAGACGACCG ATTGCATCCA GTCGGGCGTC
TGGACGACCG ACGACTTCGA CTTCACGCAA CCGGGCGCGG ATCTGGCGGT AAAGAACGCG
CTGCCGCAGA AGACAGCGCA TAACCGGCTG AGCGTCTACG AATGGCCGGG CGACTATACG
GATGCGAAAG ACGGCGCGCA GTTCGCGCGC GTGCGCATGG AGGAAATCCG CGCGCTGGGT
GAGCGTGCCA CGGGCAGGGG GCATCTGCGC AACGTGGTGT GCGGCACGAC CTTTACGCTC
GCGGGCTACC CGCAGGAGGC GGCAAACCGG GAGTACCTCG TAATCGGCGC GAAGCTGCTG
GCGGAAGAAA CCGGCGAGCA AACGGGCGCG GGTCAATACC GCATCGACAC GACGTTCGAG
GTGCAGCCGG CCACCACGAT GTTCCGCGCA CCCCGCACGG TGGCGAAGCC GCGCACCACC
GGACCGCAAA CCGCGATCGT GACGGGGCCG CCCGGCCAGG AAATCTGGAC CGACAGATAC
GGCAGGGTGA AGCTGAAGTT TCACTGGGAC CATTCACCCG TGAACGACCA GAACTCATCG
TGCTGGGTGC GGGTGTCGTA TCCGTGGGCG GGCAGCAACT TCGGCGGCGT GAACATACCG
CGCGTGGGTC AGGAGGTGAT CGTCGATTTC GAGAATGGCG ATCCCGACCG GCCCATCGTG
ACGGGGCGCG TGTTCAATGC CGCCTCCATG CCGCCGTGGG AGTTGCCGGG CAACGCGACG
CAAAGCGGCA TGCTCTCGCG CTCGATGAAA GGCCACTATG GCACAGCCAA CGCGATCCGC
TTTGAAGATA AGGAAGGCGC GGAGGAACTA TGGCTGCAGG CCGAGCGCGA CATGCGTACC
GAGGTCGAGC ACGATGAGTC GCATACCGTA CGACACGACC GCACGAGAAC GGTCGGACAT
GACGAATCCA CCACGATTGA CCACGACCGC ACTGAAAAGG TGGGGCGCGG TGAGCAGGTT
GATATCGGTG AGGACCGCCG CCACAGCATA GGCAACGATG CGCATCTCTC TGTCGGGCGC
GATCACAAAC TGCGCATAGG CAAGGATCGT ATTGAGGATA TCGGCAACAA CCGCAAGGAC
ACAATCGGGG CCGACTTCCG GATCAACACG GGTGGTCACG TCGCGCATAC GGTGAAGGGA
CATCACCAGA TCGAGGCGGG ACAGGCCATT AAACGCCACA CCCCCATCTA TCAGCTACAG
GCCGGCGAAG CTGCTGAAAT CATCGGCCCG GCCGGAAAGA TCACGCTCGA CAGTCATGGC
ATCACGCTGG AAGCGGTCAG GATTCTGCTG AAGGGACCGG TTCACGCCAG CACGGGCTGG
GTCGAGAACT CGCTGGACAT GCGCTCAGAG GTCCGGCAAT GCACGTTCAC ACCCGACTTT
TTCCCGTTTT CCGGCTAG
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| Protein sequence | MLNFVTRRTL TVSGATLPTL PDGEPALQLR TIAGEETLST IYEYELSLVT PVDPLLPDST
AANFDLKEMI GGELTVTIQL DGMGTFVPGM AGASGAANFG AGMREISGIV TAASLVSQLN
RQYLYRLKMQ PWIVLAERRT DYRIFQNKTV VEIIDEVLKS NYLYSYVKRL GGRYSNLVYQ
VQYGESDFAF IQRLMAEHGI YWFFEHSRSF HRMVLVDNLG AHKPVESLAY QTLWYYPPGH
KIDREYIEEF QTTDCIQSGV WTTDDFDFTQ PGADLAVKNA LPQKTAHNRL SVYEWPGDYT
DAKDGAQFAR VRMEEIRALG ERATGRGHLR NVVCGTTFTL AGYPQEAANR EYLVIGAKLL
AEETGEQTGA GQYRIDTTFE VQPATTMFRA PRTVAKPRTT GPQTAIVTGP PGQEIWTDRY
GRVKLKFHWD HSPVNDQNSS CWVRVSYPWA GSNFGGVNIP RVGQEVIVDF ENGDPDRPIV
TGRVFNAASM PPWELPGNAT QSGMLSRSMK GHYGTANAIR FEDKEGAEEL WLQAERDMRT
EVEHDESHTV RHDRTRTVGH DESTTIDHDR TEKVGRGEQV DIGEDRRHSI GNDAHLSVGR
DHKLRIGKDR IEDIGNNRKD TIGADFRINT GGHVAHTVKG HHQIEAGQAI KRHTPIYQLQ
AGEAAEIIGP AGKITLDSHG ITLEAVRILL KGPVHASTGW VENSLDMRSE VRQCTFTPDF
FPFSG
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