| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2992 |
|---|
| Symbol | |
|---|
| ID | 4004684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1611296 |
|---|
| End bp | 1612348 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637946649 |
|---|
| Product | ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_558039 |
|---|
| Protein GI | 91782833 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0712485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCT ACATTCTCAG ACGATTACTG TTGATGGTGC CGACCCTGCT CGGCGTAGTC
ACACTGACCT TTGTCGTCAC GCAGTTCGTG CCGGGTGGGC CGGTCGAACA GGTGATGACG
CAACTCCGCC ACGGCGCCGG CCGTGGCGGA GAGGCGGGGG CGGGTGGCGG CGGCTATCAC
GGCAGCCAGG GCGTCGATCC GCAGCAGATC GAGCAGATCA AGAAGCAGTT CGGCTTCGAC
AAGCCACCGC TCGAACGCTA TCTGCTGATG CTCAGGCGCT ACGCGACGTT CGATCTCGGC
CAGTCCTACT ATCAGCACGA CAGCGTGTGG GACGTCATCA AATCGAAGCT GCCCGTATCG
ATCACGCTCG GCTTATGGAC GGTACTGCTC ACCTATCTGA TATCGGTGCC GTTGGGGATC
GCGAAAGCGG TGCGCAACGG CTCGCGTTTC GATACCGTCA CGAGCGTGCT GGTACTCGCC
GGCTACGCAA TTCCCGGTTT CGTGCTCGGC GTCTTGCTGC TGATGTTATT CGGCGGCGGC
ACGTTCTGGC AGGTGTTTCC CATGCGCGGT CTCACATCGG ATAACTTCAA CGATCTCAGC
GCATTCGGCA AGATACTCGA CTATCTCTGG CATATCGTGC TGCCGGTCAC GGCTTCGGTG
GTCGGCAACT TCGCGATCGT CACGATTCTG ACCAAGAACA CGTTTCTGGA AGAGATCGGC
CGTCAGTATG TGTTGACGGC ACGAGCCAAG GGTGCCCCGG AGCGCGACGT GCTGTGGAAA
CACGTGCTGC GCAACGCCGC GATTCCATTG CTCACGGGCT TGCCCGCGGC CTTCGTCGGG
GCGTTTCTGA ACGGCAATCT GCTGATCGAA ACGCTGTTCT CGCTCGACGG CATGGGCCAA
CTGTCGTACG ACTCGGTGAT TCGCCGTGAT TATCCGGTCG TGCTCGGATC GCTCTTTCTC
TTCACGCTGA TTGCCCTCGT AACCAAACTC ATTGCTGACG TCTGCTATGT CCTCGTCGAC
CCCCGCATCC AATTCAACCG CCTGGACCGC TGA
|
|---|
| Protein sequence | MLAYILRRLL LMVPTLLGVV TLTFVVTQFV PGGPVEQVMT QLRHGAGRGG EAGAGGGGYH
GSQGVDPQQI EQIKKQFGFD KPPLERYLLM LRRYATFDLG QSYYQHDSVW DVIKSKLPVS
ITLGLWTVLL TYLISVPLGI AKAVRNGSRF DTVTSVLVLA GYAIPGFVLG VLLLMLFGGG
TFWQVFPMRG LTSDNFNDLS AFGKILDYLW HIVLPVTASV VGNFAIVTIL TKNTFLEEIG
RQYVLTARAK GAPERDVLWK HVLRNAAIPL LTGLPAAFVG AFLNGNLLIE TLFSLDGMGQ
LSYDSVIRRD YPVVLGSLFL FTLIALVTKL IADVCYVLVD PRIQFNRLDR
|
|---|
| |