Gene Bxe_A2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2988 
Symbol 
ID4004688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1616522 
End bp1617883 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content64% 
IMG OID637946653 
Producthypothetical protein 
Protein accessionYP_558043 
Protein GI91782837 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT TCATCTCTTC GCGCACCGCC ACGTCGGTGG ATTGGCAGCG GCATTTCACG 
GCGCTCGCCG ACGCAATCGG GCGCCTGCAA CAAGGTGGTG AAACCACGCT CAGTTCGTTC
GCCGGCGAGC AGTCCGATTT CATTCGTTTC AATTCGGGCA AGGTGCGGCA GACCGGCAGC
GTGTCGCAAG GCAAGCTGAC CTTGCGTCTG ATCGACGGCG CACGCCAGGC GTATTCCACG
CTGACCGTGT GCGGCGATCT GCAACAGGAT CTCGATGAAG TGAGCGCCGC GCTCGTCACC
TTGCGGGAGG GGCTGCGCGA CGCGGCGGAC GATCCGCATC TGCTGTTCGA CACGTCGAAA
TGGGAGCGAA CCACGCAGCG TTCAGGCAAG CTGCCGGACC CTGACGGCTT GGCGAGTGTC
GTCGCGCAAT GTGCGCAAGG GCTGGATTTC GTGGGGTTTT ACGCGGGCGG CACGATCGTG
CGCGGTTTCG CGTCCACGAG CGGCAGCCGT GGCTGGTATG AAGTGGACAA CTTCAATTTC
AGCTGGTCGC TGTACGACCC GAGCGGCCGC GCGATCAAAA CGACCTACGC CGGCGACGAC
TGGAGCGACG CCGTGTTTGC GCGCAAAGTC GAACAGGCCG CGAACCGGCT TGCCGTGCTC
GCGCGCGCGC CGCGCACGTT GGCGCCGGGA CGCTACCGTT CCTATCTGGC ACCCGCGGCG
TTGTCCGAAC TGCTCGGCGT CACCGCGTGG AACGGTTTTT CCGCTCGCGC GCAGGCGAGT
TCACGCAGCG AGTTGTACAA GCTGCATGTG GGAGAAGTCG TAGTCGACCC GCGCGTGACG
ATCAGCGAAG ATCTGAGTCT CGGCATCACG CCAGGCTTCA ACGACGACGG CTATCTGCGC
GACAGCGTCC CGTTGATCCA GGCTGGCCGC AGTGCGGAAC GGCTGACCAA CGCACGCAGT
GCACGCGAAT ACGGCTTGAC GCCCAATGGT GCGCTCACCG GCGAGTCACC GGCCGCGCTT
TCCATGCAGG CGGGCGATCT GCCGGAAGAA GACGTGCTGG CGAAACTCGG CACCGGGCTC
TACATCGGCA ATCTCTGGTA CGTGAACTTC TCGGACCGCA TGAATTGCCG CCTCACCGGC
ATGACGCGCT TCGCGACTTT CTGGGTCGAG AACGGAGAAA TCGTCGCCCC GCTCGAGGCC
ATGCGTTTCG ACGACAGCCT GTACCGTTTG CTCGGCAGTG AACTCGAACA ACTCGGCGCA
CAGGCCGAAC TGCTTTTGAG CGACTCGACG TGGGGCGAGC GTGCCACGGG CGGCATGCAA
TTGCCCGGCA TTCTGGTGAG GTCATTCGAA TTGACGTTAT GA
 
Protein sequence
MSQFISSRTA TSVDWQRHFT ALADAIGRLQ QGGETTLSSF AGEQSDFIRF NSGKVRQTGS 
VSQGKLTLRL IDGARQAYST LTVCGDLQQD LDEVSAALVT LREGLRDAAD DPHLLFDTSK
WERTTQRSGK LPDPDGLASV VAQCAQGLDF VGFYAGGTIV RGFASTSGSR GWYEVDNFNF
SWSLYDPSGR AIKTTYAGDD WSDAVFARKV EQAANRLAVL ARAPRTLAPG RYRSYLAPAA
LSELLGVTAW NGFSARAQAS SRSELYKLHV GEVVVDPRVT ISEDLSLGIT PGFNDDGYLR
DSVPLIQAGR SAERLTNARS AREYGLTPNG ALTGESPAAL SMQAGDLPEE DVLAKLGTGL
YIGNLWYVNF SDRMNCRLTG MTRFATFWVE NGEIVAPLEA MRFDDSLYRL LGSELEQLGA
QAELLLSDST WGERATGGMQ LPGILVRSFE LTL