Gene Bxe_A2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2949 
Symbol 
ID4003957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1662632 
End bp1663591 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content65% 
IMG OID637946690 
Productputative NAD dependent epimerase/dehydratase 
Protein accessionYP_558080 
Protein GI91782874 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.262327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGTCA TCGTGTTTCT CACCAAGGAG AACGAATTGA AGATTTTCAT CACGGGCGCA 
AGCGGTTTCA TCGGGGGATC CATTGCAGCG CATCTCGCGC GCGCCGGCCA CACCGTTCGC
GGTCTGATCC GCAACCCCGA ACATGGCGCC GAACTGAAGC GGCTCGGTAT CGAACCCGTG
ATCGGCACGC TCGACGACCG CGCGTTGCTG ATCGCCGAAG CGAAAGCCGC CGATGCCGTC
ATCAATGCCG CGAGCAGCGA CCATGAAGGC GCGGTGAAAG CGCTGATCGA AGGACTCGCC
GGGTCCGGCA AGACGTTCCT GCACACGAGC GGTTCGAGCA TCGTCGGCGA TGCATCGGGC
GGCGAAGCGG GTCAGGCGCG CATCTATCAC GAAGACGCGT TGCCCACGCC GACCGCCGAC
AAAGCCGCGC GCGTGGCGAT CGATCAACTC GTGCTCGACG CCGCGCAGCA GAACATCCGC
TCGGCCGTAC TGTGCAACAC GCTGATTTAC GGCCACGGCG CGGTGTCCGG CAGCGCGAGC
GTGCAATTGC CGCGCCTCGT GCGTCAGGCG CAGAAGAGCG GCGTGGTGCG TCACGTGGGC
AGCGGCGGCA ACATCTGGTC GAACGTGCAT ATCGACGACG TGGCCGAGCT CTATCGCCTC
GCACTCGAGA AAACGCCGGC GGGCACGTTC TATTTCGTCG AAAGCGGCGA GGCGTCGTTC
CGCGACATGA GCGCCGCGAT TGCGCGCGCG ATGAAGCTCG GCGAACCGCA AGACTGGCCG
CTCGAAGAAG CGCAAAAGGA ATGGGGCTAC GAAATGGCTT CGTATGGCCT CGGCTCGAAC
AGCCGCGTGC GCGGCGAGCG CGCCCGCAAG CTGCTCGGCT GGCAACCGAA GCGTACCTCG
GTGATCGACT GGATCGAGCA CGAGATGATG TCGCCGAAGG GGGCGTCATC CGAAGCGTGA
 
Protein sequence
MHVIVFLTKE NELKIFITGA SGFIGGSIAA HLARAGHTVR GLIRNPEHGA ELKRLGIEPV 
IGTLDDRALL IAEAKAADAV INAASSDHEG AVKALIEGLA GSGKTFLHTS GSSIVGDASG
GEAGQARIYH EDALPTPTAD KAARVAIDQL VLDAAQQNIR SAVLCNTLIY GHGAVSGSAS
VQLPRLVRQA QKSGVVRHVG SGGNIWSNVH IDDVAELYRL ALEKTPAGTF YFVESGEASF
RDMSAAIARA MKLGEPQDWP LEEAQKEWGY EMASYGLGSN SRVRGERARK LLGWQPKRTS
VIDWIEHEMM SPKGASSEA