| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2939 |
|---|
| Symbol | |
|---|
| ID | 4003967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1674911 |
|---|
| End bp | 1676830 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637946700 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_558090 |
|---|
| Protein GI | 91782884 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.494843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGT GCCTGGCGGT TGTTCTCAGG CTGGCCATCT GGCTGACGCT GACGCCCGGC
GCGCTGTCGT CGGCTATCGC ATGGGCCGAC GGCAGCGCGT CCACCGCATC CGGCGACGAT
CGCGCGCCTT CGACGATCGA GCGCGACGTC CATCTCTTCA CGATCCAGAA AGACGGCTCC
ATCGAGGAAC ACGACGACAC GGTCCTGCGC GCCAACACCA CGAGTGGCGT CGACGATATC
GCGCAACGCT ATGTGTGGTT CAACAAGGAC ATCGAGCAGG TGCAGTTGCT GGCCGCGGAA
ACGATCGATT CGGGTGGCGT CGCGCATCCG GTCGGTCCGG AGGCGATCCG CGACGTGCAG
GAGCCGCGCT CCGCAGGCGC ACCGAGCTTC GAGGACGGCG TGTTGCGCAC GGTGATCTTC
CCCGGCGTGG AGCCGGGCTC ACGCGTGCAC CTGGCGTTTC GCAAGACCCG CACGAAGCCG
TTGCAGGCGG GCACCTTCGC GTATCTCGTC GAACCGACGC GCGAGCCCGT CGAACTGCAG
CGCCTGATTT TCGATCTGCC CGCCGACGTG CCGCTTTATG CCGACGCGCG CGGCTACGTC
GCCGTGCCGC CGGTCACGGC CAACGGCCGT ACCCGCTATG AGTTCGACTA TCGGCACGGG
CCGTATGCGC CGCTCGAAGC GGGGTCGGTC GGCTATGCGA ACTGGGGCGA CCGCCTGATG
GTATCGACGG TGCCGGACTT CGCGAATTTT GCCGCGCGGT ATCGCGGGCC CGCGCTCGAC
GCGACGATCG GCGATCCGGC GATCGTCCGC CTCGCGCAGG CGCTGACCGC CGGCGCCGCC
GACCCGCGCG CGAAGGCGCA GTTGCTATAC GACTGGATGC GTTTGAATAT CCGCTACGTG
GCCTTGTTTC TCGGCGAAAC GGCGGCGATT CCGCACAAGG CGGCCGACAT CCTGCGCAAC
CGTTATGGCG ACTGCAAGGA TCATGTCGCG CTTTATGGCG CATTGCTGGC CGCGGTGGGC
ATCCGCAGCG AGGCGGTGTT GCTCAATCTC GGGCCGTACT ACAGTTTGCC CGACGTGCCC
GGCTACGGCG CAAGCGCGAT CAATCACGCG ATTATCTGGA TTCCTGAGTT GTCGTTGTAC
GCGGATACGA CGGCCGGCGG CACGGCGTTC GGTTATCTGC CGCCGAGCGT GATGGACAGG
CCGGTGCTGC TGGTGGACGA GGGTGTCCTC TCGCGAACGC CGGCCACGCA GTTGCGCGAA
CGCAGTGCGC GCGTGCAGAT CGACATCGAT GAAAGCGGCG CGGCGAATTA CGCCTACCGC
GCGGAAGACA CCGGTTTTAC CGCCGAAATC GAGCGCAACA CGTTTCGGCG GGCGACGCGG
CAACGCACGC AGCAGATCGC CGCGAGCCGT TTATTACAGA CGGGTCTGCA CGGCACCGCG
CAATTGCGCA CGGCGGATCT CACCGCCACG AATGGACCGT TTGCCACGTC GATGCAGGGA
AAAGTGGAGC ACTTCGTCTG GACCGACGGC ACCACGGCAA TACCGGCATT GACGAGTTTC
TCCGGCGGTA TGGGCTCGCA GGTGCAGGCA TGGCTTGCGG AGCCTCTGAG GACTCAGCCG
TGGACTTGCC TGGGCGGAGA GTTCGACGAG ACGCTGGAAA TGACGCTGCC GCGCTTCGTG
CGGGTGATGG ATCTGCCAGC GGATACAGCG GTGCAGAACC GCTTCATGAC GTTTTCATCC
AGCTATGTGT TCGATCCCGC CGCGCGGCTC CTGCAGGTCA GACGCCACCT GCGCGCCGCC
TTTGGCCATC AGATGTGTTC TGCTAATGAA TTCACGGGAA TGCACGACGA TCTCGTGCGG
ATCGAGCGGG ATCTCGATGC CGGCCTGGTC GTCAAGGTTG CGGATGCGAA GAACCGGTAG
|
|---|
| Protein sequence | MRRCLAVVLR LAIWLTLTPG ALSSAIAWAD GSASTASGDD RAPSTIERDV HLFTIQKDGS
IEEHDDTVLR ANTTSGVDDI AQRYVWFNKD IEQVQLLAAE TIDSGGVAHP VGPEAIRDVQ
EPRSAGAPSF EDGVLRTVIF PGVEPGSRVH LAFRKTRTKP LQAGTFAYLV EPTREPVELQ
RLIFDLPADV PLYADARGYV AVPPVTANGR TRYEFDYRHG PYAPLEAGSV GYANWGDRLM
VSTVPDFANF AARYRGPALD ATIGDPAIVR LAQALTAGAA DPRAKAQLLY DWMRLNIRYV
ALFLGETAAI PHKAADILRN RYGDCKDHVA LYGALLAAVG IRSEAVLLNL GPYYSLPDVP
GYGASAINHA IIWIPELSLY ADTTAGGTAF GYLPPSVMDR PVLLVDEGVL SRTPATQLRE
RSARVQIDID ESGAANYAYR AEDTGFTAEI ERNTFRRATR QRTQQIAASR LLQTGLHGTA
QLRTADLTAT NGPFATSMQG KVEHFVWTDG TTAIPALTSF SGGMGSQVQA WLAEPLRTQP
WTCLGGEFDE TLEMTLPRFV RVMDLPADTA VQNRFMTFSS SYVFDPAARL LQVRRHLRAA
FGHQMCSANE FTGMHDDLVR IERDLDAGLV VKVADAKNR
|
|---|
| |